CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJC16_HUMAN (DnaJ homolog subfamily C member 16 OS=Homo sapiens GN=DNAJC16 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1
Query:  217 PYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            PY VLGV+ +A+  +IK+AY+KLA ++HPD NK+P AE+KF++I  AY  L N E R  YD  G+   +  Y     Q  Q +  Y F +F
Sbjct:   30 PYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGY-----QKQQQQREYRFRHF 115          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJB14_MOUSE (DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 1
Query:  190 LLRASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLR--DVQITIEDFF 522
            +L  ++ ++ YEVLGV   A  +++K+AYRKLALK+HPD N  P A + F +I +AY  L N E R++YD           TG  + A + +  G  NF R  +  IT ED F
Sbjct:  100 VLSINKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYD----------LTGSEEQACNHQNNGRFNFHRGCEADITPEDLF 202          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD-----------------SGNRTSDFSYSTGPSQNAQDEEFYG----FGNF 486
            Y+ LG+A  A+ +EIKRAYR+ AL+YHPD NKEP AEEKF  I  AY+ L +   R  +D                  G   + FSY+     +A   EF+G    F NF
Sbjct:    6 YQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSSGGTNGTSFSYTFHGDPHAMFAEFFGGRNPFDNF 115          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_NOSP7 (Chaperone protein dnaJ OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGV+     +E+K+AYR+LA KYHPDVNKEP AE++F  I  AY  L   E+R +YD
Sbjct:    6 YEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRARYD 65          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIRA (Chaperone protein dnaJ OS=Deinococcus radiodurans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGV+ +A+ADEIK AYRKLALK HPD NKE  A EKF ++  AY+ L ++E R  YD
Sbjct:    4 YELLGVSRTASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRAHYD 63          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCZ (Chaperone protein dnaJ OS=Bacillus cereus (strain ZK / E33L) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCQ (Chaperone protein dnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC7 (Chaperone protein dnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC3 (Chaperone protein dnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLG++  A+ DEIK+AYR+LA KYHPDV+KE NA EKF  ++ AY  L + + R +YD
Sbjct:    7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYD 66          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DJC16_HUMAN1.503e-1343.96DnaJ homolog subfamily C member 16 OS=Homo sapiens... [more]
DJB14_MOUSE1.503e-1339.82DnaJ homolog subfamily B member 14 OS=Mus musculus... [more]
DNJB1_BOVIN1.963e-1340.00DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNAJ_NOSP71.963e-1355.00Chaperone protein dnaJ OS=Nostoc punctiforme (stra... [more]
DNAJ_DEIRA1.963e-1360.00Chaperone protein dnaJ OS=Deinococcus radiodurans ... [more]
DNAJ_BACHK1.963e-1356.67Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]
DNAJ_BACCZ1.963e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACCQ1.963e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC71.963e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC31.963e-1356.67Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
back to top