CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLA (Chaperone protein dnaJ OS=Lactococcus lactis subsp. lactis GN=dnaJ PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFG 480
            YE LGV  +A+ DEIK+AYRK++ KYHPD+NKE  AEEK+  ++ AY TL + + R  YD  G   ++  +  G    A    F GFG
Sbjct:    7 YERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEEKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASG--FSGFG 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSD 420
            Y++LGV+  ATA+EIK+AYR+LA +YHPD++ + NA EKF  I  AY+ L + E R++YD   ++ D
Sbjct:    7 YQILGVSKDATAEEIKKAYRRLAKEYHPDISADENASEKFKEINEAYHILSDEERRKEYDRILKSGD 73          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD----SGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YE+LGV+  A   EIK+AYR+LA KYHPD+NK +P+AEEKF  I  AY  L + + R +YD    +G    DF        N +D    GFG F
Sbjct:    8 YEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDF--------NFEDFAQRGFGGF 93          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKE-PNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGV+ SA  DEIK+AYRKLALKYHPD N +   AEEKF     AY  L N + RR+YD
Sbjct:    6 YEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 48/117 (41.03%), Postives = 62/117 (52.99%), Query Frame = 1
Query:  202 SRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQI-TIEDFFKDLQEEF 543
            ++++  YE+LGV  +AT +EIKRAYR+LA +YHPD N     AEEKF  I  AY  L + E R+ YD  G+   D  Y    S         GFG    D    +  D F+DL E F
Sbjct:    2 AQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAAFDPKYGAQGSGGFSG----GFGGGFADFDFGSFGDIFEDLFEGF 114          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ACHLA (Chaperone protein dnaJ OS=Acholeplasma laidlawii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD----SGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            Y+VLG++ SA+ DEIK+AYR LA KYHPDV+KE +AE KF  ++ AY+ L +S  + +YD    +G     F  + G         F GFG F
Sbjct:    7 YDVLGISKSASQDEIKKAYRSLAKKYHPDVSKEKDAETKFKEVQEAYDVLNDSNKKAQYDRFGHAGTGQDPFGGAGG--------GFGGFGGF 91          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJC10_XENLA (DnaJ homolog subfamily C member 10 OS=Xenopus laevis GN=dnajc10 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIED 516
            Y++LGV+ +AT  EI++A++KLALK HPD NK+P+A  KF++I  AY  L + + R+KYD          + G    +     Y FG +  D++I   D
Sbjct:   38 YDLLGVSKAATNREIRQAFKKLALKLHPDKNKDPDAHNKFLKINRAYEVLKDEDLRKKYDKYGEKGLDEQNQGGGYQSWSYYRYDFGIYDDDLEIITLD 136          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_SYMTH (Chaperone protein dnaJ OS=Symbiobacterium thermophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YE+LGV  +AT  EIK+A+R LA KYHPD NK +P+A EKF  I  AY  L + E R +YD       F ++      A    F GFG F
Sbjct:   10 YEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSDPEKRARYD------QFGHAAEQMGGAGGNPFEGFGGF 93          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  202 SRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS 402
            S +   YE+L V+ SAT  +IK+A+RKLA+KYHPD NK+ +AEEKF  +  AY  L + E R+ YD+
Sbjct:    2 SSKRDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKLYDT 68          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_LEIXX (Chaperone protein dnaJ OS=Leifsonia xyli subsp. xyli GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGN 483
            YEVLGV  +AT DEIK+AYR+LA + HPDVN    A+E+F  + HAY+ L + + R++YD G   S F    G        +F GFG+
Sbjct:    5 YEVLGVERNATPDEIKKAYRRLARELHPDVNPSTEAQERFKLVTHAYDVLSDPQQRQQYDRGG-ASGFGGGGG-------ADFSGFGD 84          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_LACLA2.564e-1345.45Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_HYDTH2.564e-1349.25Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_HALOH2.564e-1345.74Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_CHLP82.564e-1360.66Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ANATD2.564e-1341.03Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_ACHLA2.564e-1344.09Chaperone protein dnaJ OS=Acholeplasma laidlawii G... [more]
DJC10_XENLA2.564e-1338.38DnaJ homolog subfamily C member 10 OS=Xenopus laev... [more]
DNAJ_SYMTH3.348e-1345.56Chaperone protein dnaJ OS=Symbiobacterium thermoph... [more]
DNAJ_MYCGA3.348e-1350.75Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
DNAJ_LEIXX3.348e-1345.45Chaperone protein dnaJ OS=Leifsonia xyli subsp. xy... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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