CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLC (Chaperone protein dnaJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOL6 (Chaperone protein dnaJ OS=Escherichia coli O6 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOHS (Chaperone protein dnaJ OS=Escherichia coli O9:H4 (strain HS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO8A (Chaperone protein dnaJ OS=Escherichia coli O8 (strain IAI1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO81 (Chaperone protein dnaJ OS=Escherichia coli O81 (strain ED1a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO7I (Chaperone protein dnaJ OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO5E (Chaperone protein dnaJ OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAETKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO57 (Chaperone protein dnaJ OS=Escherichia coli O157:H7 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO55 (Chaperone protein dnaJ OS=Escherichia coli (strain 55989 / EAEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
[Close]
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO45 (Chaperone protein dnaJ OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:  208 RESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNK-EPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            ++  YE+LGV+ +A   EIK+AY++LA+KYHPD N+ +  AE KF  IK AY  L +S+ R  YD
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYD 67
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_ECOLC6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOL66.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O6 GN=d... [more]
DNAJ_ECOHS6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O9:H4 (... [more]
DNAJ_ECO8A6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O8 (str... [more]
DNAJ_ECO816.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O81 (st... [more]
DNAJ_ECO7I6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O7:K1 (... [more]
DNAJ_ECO5E6.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O157:H7... [more]
DNAJ_ECO576.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O157:H7... [more]
DNAJ_ECO556.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECO456.981e-1149.23Chaperone protein dnaJ OS=Escherichia coli O45:K1 ... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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