CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLG++  A+ DEIK+AYRKL+ KYHPD+NKE  A+EKF  I  AY  L +   R  YD         +     Q     +F GF  F
Sbjct:    7 YEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFG---GQGFNGSDFGGFSGF 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLG++  A+ DEIK+AYRKL+ KYHPD+NKE  A+EKF  I  AY  L +   R  YD         +     Q     +F GF  F
Sbjct:    7 YEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFG---GQGFNGSDFGGFSGF 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLG++  A+ DEIK+AYRKL+ KYHPD+NKE  A+EKF  I  AY  L +   R  YD         +     Q     +F GF  F
Sbjct:    7 YEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFG---GQGFNGSDFGGFSGF 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLG++  A+ DEIK+AYRKL+ KYHPD+NKE  A+EKF  I  AY  L +   R  YD         +     Q     +F GF  F
Sbjct:    7 YEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFG---GQGFNGSDFGGFSGF 92          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCMS (Chaperone protein dnaJ OS=Mycoplasma mycoides subsp. mycoides SC GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  205 RRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQD-EEFY------GFGNFLRDVQITIEDFFKDLQEEFQ 546
            +++  YEVLGV+ +A+  EI++AYRKLA +YHPD+NK P+A +K + I  A + LL+ + R++YD     + F  S+G S N  D E+ +      GF +F         DFF   + ++Q
Sbjct:    2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHNA-FDGSSGFSSNFADFEDLFSNMGSSGFSSFTN----IFSDFFGSNKSDYQ 117          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YEVLGV  +A+ +E+K+AYRKLA KYHPDVNKE +AE KF  +K AY+TL + + + +YD
Sbjct:    7 YEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQ---DEEFYGFG----------NFLRDVQITIEDFF 522
            Y+VLGV P+AT +E+K+AYRKLALKYHPD  K PN  EKF +I  AY  L +S+ R  YD G   +      G    +     + F+G G          N +  + +T+ED +
Sbjct:    8 YDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAGGGFGSPMDIFDMFFGGGGRMQRERRGKNVVHQLSVTLEDLY 119          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQ---DEEFYGFG----------NFLRDVQITIEDFF 522
            Y+VLGV P+AT +E+K+AYRKLALKYHPD  K PN  EKF +I  AY  L +S+ R  YD G   +      G    +     + F+G G          N +  + +T+ED +
Sbjct:    8 YDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAGGGFGSPMDIFDMFFGGGGRMQRERRGKNVVHQLSVTLEDLY 119          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDV 498
            YE+LGV+     DE+KRAYR+LA +YHPDVNK+P AEEKF  I  AY  L   E+R +YD   R  +   S   +  A   +  GF +    +
Sbjct:    6 YEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYD---RFGEAGVSGAGAAGADYGDMGGFADIFETI 95          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDV 498
            YEVLGV+  A+ DEIK+AYRKL+ KYHPD+N+E  AEEKF  I  AY  L +   R  YD            G       ++F GFG    D+
Sbjct:    7 YEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKRANYDQFGHDGP-QGGFGGQGFGGGQDFGGFGGGFEDI 98          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_STAA82.319e-1443.82Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA32.319e-1443.82Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA22.319e-1443.82Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA12.319e-1443.82Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_MYCMS2.319e-1437.19Chaperone protein dnaJ OS=Mycoplasma mycoides subs... [more]
DNAJ_BACSK2.319e-1458.33Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNJA1_RAT3.028e-1439.47DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_MOUSE3.028e-1439.47DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNAJ_SYNP23.028e-1443.01Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STACT3.028e-1444.09Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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