CX286802

Overview
NameCX286802
Unique NameCX286802
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length555
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  202 SRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQD--EEFYGFG 480
            S +   YEVLGV+  AT D+IK A+RK A++YHPD NKEP+AEEKF  +  AY  L + + R  YD  G+   D  +  G   +  D   +F+G G
Sbjct:    2 SSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGVDGQFGGGAGFDPFDIFNQFFGGG 97          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNJB9_RAT (DnaJ homolog subfamily B member 9 OS=Rattus norvegicus GN=Dnajb9 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNFLRDVQITIEDFFKDLQEEFQN 549
            Y++LGV  SA+  +IK+A+ KLA+KYHPD NK P+AE KF  I  AY TL ++  R++YD    +   +++ G  Q +    F    NF        +D FKD     QN
Sbjct:   28 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIGHS---AFTNGKGQRSNGSPFEQSFNF------NFDDLFKDFNLFGQN 128          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            Y+ LG++  A+ DEIKRAYRKL+ KYHPD+NKEP AEEK+  I  AY TL +++ R  YD
Sbjct:    7 YDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            Y+ LG++  A+ DEIKRAYRKL+ KYHPD+NKEP AEEK+  I  AY TL +++ R  YD
Sbjct:    7 YDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MICAN (Chaperone protein dnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGV+  A  ++IKRAYR+LA KYHPDVNKEP AEE F  I  AY  L   E+R +YD
Sbjct:    6 YEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYD 65          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGFGNF 486
            YEVLG++  A+ +EIKRAY+KL+ KYHPD+NKE +AE+KF  I  AY  L + + + +YD            G       ++F GFG F
Sbjct:    7 YEVLGLSKGASKEEIKRAYKKLSKKYHPDINKEADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHA-----GMGQGAGFGGQDFGGFGGF 90          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKE-PNAEEKFMRIKHAYNTLLNSESRRKYD 399
            YE+LGVA SA  DEIK+AYRKLALKYHPD N +   AEEKF  +  AY  L N + RR+YD
Sbjct:    6 YEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYD 66          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DJC16_CHICK (DnaJ homolog subfamily C member 16 OS=Gallus gallus GN=DNAJC16 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  196 RASRRESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDSGNRTSDFSYSTGPSQNAQDEEFYGF 477
            +A+    PY VLGV  S++  +IK+AY++LA ++HPD NK+P AE+KF++I  AY  L N E R  +D   R  D   S G SQ+ Q  +F+ F
Sbjct:   22 QAAPERDPYRVLGVGRSSSQADIKKAYKRLARQWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFD---RYGDAGESQGYSQH-QQRQFHHF 111          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: MDJ1_YEAST (DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae GN=MDJ1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  211 ESPYEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYD--------SGNRTSDFSYSTGPSQNAQDEEFYGF 477
            + PY+ LG+  SAT  EIK+AY KLA KYHPD+NKEP+AE+KF  +++AY  L +   R++YD         G         +G    +Q  +F GF
Sbjct:   60 KDPYDTLGLKKSATGAEIKKAYYKLAKKYHPDINKEPDAEKKFHDLQNAYEILSDETKRQQYDQFGPAAFGGGGAAGGAGGGSGSPFGSQFHDFSGF 156          
BLAST of CX286802 vs. ExPASy Swiss-Prot
Match: DNAJ_TETHA (Chaperone protein dnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 1
Query:  220 YEVLGVAPSATADEIKRAYRKLALKYHPDVNKEPNAEEKFMRIKHAYNTLLNSESRRKYDS-GNRTSDFSYSTGPSQNAQDEEFYGFGNFLRD 495
            YEVLGV   A+ DEIK+AYRKL+ KYHPDVN+E +AEEKF + +   NTL + + R  YD  G+  +D ++  G +       F GFG    D
Sbjct:    8 YEVLGVDKGASDDEIKKAYRKLSKKYHPDVNQEADAEEKFKKFQKPMNTLSDPQKRAAYDQYGHAGADANFGGGGAGG-----FGGFGGGFSD 95          
The following BLAST results are available for this feature:
BLAST of CX286802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
DNAJ_MYCPE3.028e-1443.75Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNJB9_RAT3.955e-1439.09DnaJ homolog subfamily B member 9 OS=Rattus norveg... [more]
DNAJ_STRT23.955e-1458.33Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT13.955e-1458.33Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_MICAN3.955e-1460.00Chaperone protein dnaJ OS=Microcystis aeruginosa (... [more]
DNAJ_MACCJ3.955e-1442.70Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]
DNAJ_CHLTE3.955e-1462.30Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DJC16_CHICK3.955e-1443.62DnaJ homolog subfamily C member 16 OS=Gallus gallu... [more]
MDJ1_YEAST5.165e-1441.24DnaJ homolog 1, mitochondrial OS=Saccharomyces cer... [more]
DNAJ_TETHA5.165e-1446.24Chaperone protein dnaJ OS=Tetragenococcus halophil... [more]

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Properties
Property NameValue
Genbank descriptionC01001B11Rv Veg1 Citrus clementina cDNA clone C01001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286802 ID=CX286802; Name=CX286802; organism=Citrus clementina; type=EST; length=555bp
GACAACACGCTTGTCTATCTCCCTCATCTGTTCGCAAAATCTCCTCTTTT
TCACTTTCAGAAACAAACAAACTTCACAGTAACAATACCCAGTTGCAGAT
TTAGCTATGGTGATGAATTTGGTGTCCTCTTAGTTAGTCCGCAGCCTTTT
AGAAATTTTAAGAAGAAGAGGAGAAGCAATTTTAGTACCCTTTTGAGGGC
AAGTCGCAGAGAGTCCCCTTACGAGGTTTTGGGCGTGGCTCCATCTGCGA
CTGCTGATGAAATCAAAAGGGCTTATCGGAAACTTGCTTTGAAGTATCAC
CCTGACGTTAATAAAGAGCCAAATGCAGAGGAGAAATTTATGAGGATTAA
GCATGCATACAATACATTGCTGAATTCTGAGTCACGGAGGAAATATGACT
CTGGAAATCGCACATCAGATTTTTCCTACTCCACTGGCCCAAGCCAAAAT
GCGCAGGATGAAGAATTTTACGGATTTGGTAATTTTTTGAGGGATGTCCA
AATAACAATAGAGGACTTTTTCAAAGATCTTCAAGAAGAATTCCAGAATT
GGGAA
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