CX286823

Overview
NameCX286823
Unique NameCX286823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.813e-18
Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLN--KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG--CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 566
            K + P +   +A+ +    G N+AS GSG  + TS +L   IS+ +QLQ ++        +  +   A  ++  +Y++  GS D++ NY+++   N  + YTP+QY+  L+ I+ S +KN++ LGARK  V  L  +GC P    +   H  G  C   +N   + FNK +     +  K++   K    D+F
Sbjct:   83 KDFIPPFA--EASPEQAHTGMNYASGGSGLREETSEHLGDRISIRKQLQNHK------TSITKANVPAERLQQCLYMINIGSNDYINNYFMSKPYNTKRRYTPKQYAYSLIIIYRSHLKNLHRLGARKVAVFGLSQIGCTP---KIMKSHSDGKICSREVNEAVKIFNKNLDDLVMDFNKKVRGAKFTYVDLF 264          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.093e-18
Identity = 61/195 (31.28%), Postives = 96/195 (49.23%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGY-DDRTSYLNHAISLTQQLQYYREYQSKLA-KVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVN--PLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLV 587
            PAY   +ATG  +L G N+ASA +G   D        I   QQ+  +     ++A K  G+   A  +  +++ +G GS D+L NY +   P  N+ Y  +Q+  +LV  ++  +  +Y LG RKF V  L  +GC+P+   L   ++  C   +N     FN  V +  +NL + LPD K +  DI     D+V
Sbjct:  115 PAY--SEATGDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSGGAVAIADSVTRSLFFIGMGSNDYLNNYLMPNFPTRNQ-YNSQQFGDLLVQHYTDQLTRLYNLGGRKFVVAGLGRMGCIPS--ILAQGNDGKCSEEVNQLVLPFNTNVKTMISNLNQNLPDAKFIYLDIAHMFEDIV 304          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.275e-18
Identity = 57/189 (30.16%), Postives = 93/189 (49.21%), Query Frame = 3
Query:    9 YAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 566
            Y P +    A+ +   IG N+AS G G  + TS +L   IS  +Q++ +R      AKV   K     +   +Y +  GS D+L NY++    + NK ++ ++Y+  L+  + S++K++Y LGARK  V  +  LGC P      G   +GC + +N   + FNK + +      +   D K    DIF
Sbjct:   90 YIPPFTG--ASPEQAHIGINYASGGGGIREETSQHLGEIISFKKQIKNHRS-MIMTAKVPEEK-----LNKCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLIRSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHG-GGNGCAAEVNKAVEPFNKNLKALVYEFNRDFADAKFTFVDIF 269          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.175e-17
Identity = 56/199 (28.14%), Postives = 98/199 (49.25%), Query Frame = 3
Query:   21 YLSPQAT--GKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSAS-IIKDAIYIVGSGSGDFLQNYYVNPLLN--KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            Y++P A+  G+++L G N+ASA +G  D T   L   I+   Q+  +    S++  + G +  AS  +   IY +G GS D+L NY++    +    ++PE Y+  LV  ++  ++ +Y  GARKF +  +  +GC P            C  RIN+  + FN K+ S      +  PD K    + +    D++ +P+
Sbjct:   88 YITPYASARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNEASNYLSKCIYSIGLGSNDYLNNYFMPTFYSTGNQFSPESYADDLVARYTEQLRVLYTNGARKFALIGVGAIGCSPNELAQNSRDGRTCDERINSANRIFNSKLISIVDAFNQNTPDAKFTYINAYGIFQDIITNPA 286          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.618e-17
Identity = 56/197 (28.43%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   18 AYLSPQATGKNLLI-GANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNK--VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            A+L P      +L  G N+AS G G  + T  Y     SL +Q++ ++  Q  +    G K++    +DA Y+V  GS DF+ NY + P+ +    Y  + +   L+    S +K ++ LGARK  V  L P+GC+P  R L    +  C ++ +  A++FNK  ++   +L+ +LP+      + +  + D++ +P
Sbjct:   86 AFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINNYLM-PVYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIPLQRAL--SLDGNCQNKASNLAKRFNKAATTMLLDLETKLPNASYRFGEAYDLVNDVITNP 279          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15
Identity = 49/198 (24.75%), Postives = 93/198 (46.97%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRTSY-LNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKV--YTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            P +  P  +G  +L G N+ASA +G  D + Y      SL QQ+       S+L  +   +     +  ++ ++  GS D++ NY +  L +    + P  ++++L++ ++  +  +Y LG RK  +  + PLGC+P  R         CV  +N     FN+ + S    L ++ P    V  + +  I D++ +P+
Sbjct:  101 PPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQRARGISPPDRCVDSVNQILGTFNQGLKSLVDQLNQRSPGAIYVYGNTYSAIGDILNNPA 298          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 49/198 (24.75%), Postives = 85/198 (42.93%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRT---SYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            P  L P  +   L  G NFA+  +G    T   S  N +  L  QL  ++  +  L    G  ++  +I  A+Y+   G+ D+   ++ N       T E++   ++   ++ I+ +Y LGARKFG  SL P GC P+A  +       C   +       N++       L+++L   K  + D    +   + +PS
Sbjct:   99 PPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLGDAEARRVISKAVYLFHIGANDYQYPFFANTSTFSNTTKERFIDFVIGNTTTVIEELYKLGARKFGFLSLGPFGCTPSALIINSTKIGSCFEPVTELINLHNQEFPKVLRRLERRLSGFKYALHDFHTSLSQRINNPS 296          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 45/184 (24.46%), Postives = 88/184 (47.83%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLL--NKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 557
            PA++     G ++L G N+ASA  G  + T  +L    S+ +Q++ + +   ++++    +     +  ++ +V  G+ D++ NY    L   + +Y P  ++ +L++ F++ +  +YG G RKF +  + PLGC+P            CV  +N  A+ FN ++ S    L          IF
Sbjct:  110 PAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINNYLKPRLFLSSSIYDPTSFADLLLSNFTTHLLELYGKGFRKFVIAGVGPLGCIPDQLAAQAALPGECVEAVNEMAELFNNRLVSLVDRLNSDNKTASEAIF 293          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.216e-14
Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   60 GANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQK--QLPDLKIVIFDIF 566
            G N+AS G+G  + TS +L   IS  +Q+  +R    K+   AG       +K  +Y +  GS D+L NY++      N+ ++ ++Y+  L+  + S++K++Y LGARK  V  +  LGC P      G    GC + +N   + FNKK+    +   +   +   K    D+F
Sbjct:  104 GINYASGGAGLLEETSQHLGERISFEKQITNHR----KMIMTAGVPPEK--LKKCLYTINIGSNDYLNNYFMPAPYTTNENFSFDEYADFLIQSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHG-GGKGCATEVNKAVEPFNKKLKDLISEFNRISVVDHAKFTFVDLF 270          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14
Identity = 53/200 (26.50%), Postives = 96/200 (48.00%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLL-----NKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDL 584
            K+  P YL P      +  G N+AS  +G  D T  L    + L +Q+  + + +  + +V G   +  ++K+A++ +  GS D L   Y+ P +     +K+ T     SM++++ ++ +K ++ LG RKF V  + PLGC+P AR L       C  ++N   + +N K+  +   L  +L         ++   YDL
Sbjct:   85 KSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDILN--YIQPSIPFFSQDKLPTDVLQDSMVLHL-TTHLKRLHQLGGRKFVVVGVGPLGCIPFARALNLIPAGKCSEQVNQVVRGYNMKLIHSLKTLNNELRSEDYNTTFVYANSYDL 281          
The following BLAST results are available for this feature:
BLAST of CX286823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDL35_ARATH1.813e-1829.53GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]
GDL29_ARATH3.093e-1831.28GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL36_ARATH5.275e-1830.16GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL82_ARATH1.175e-1728.14GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]
GDL31_ARATH2.618e-1728.43GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL28_ARATH3.200e-1524.75GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GRIP4_ARATH7.130e-1524.75GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL75_ARATH7.130e-1524.46GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL37_ARATH1.216e-1429.31GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GDL81_ARATH1.588e-1426.50GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01001D12Rv Veg1 Citrus clementina cDNA clone C01001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286823 ID=CX286823; Name=CX286823; organism=Citrus clementina; type=EST; length=600bp
TTAAGACTTATGCGCCAGCATATCTCAGCCCACAGGCTACAGGGAAAAAC
CTCCTTATTGGAGCCAACTTTGCTTCAGCGGGATCTGGTTATGATGACAG
GACATCCTACTTAAATCATGCAATTTCATTGACTCAGCAGTTGCAGTACT
ATAGAGAGTACCAGAGTAAGCTAGCAAAGGTAGCCGGTAGCAAACAATCA
GCTTCCATAATCAAGGATGCGATATACATAGTGGGTTCTGGGAGTGGTGA
CTTTCTTCAGAATTACTATGTCAATCCTTTACTTAACAAAGTCTACACTC
CTGAGCAGTATAGCTCAATGCTTGTCAATATTTTCTCAAGTTTTATTAAG
AACATGTATGGATTGGGGGCAAGAAAATTTGGAGTGACTTCACTGCCACC
ATTGGGTTGCCTTCCAGCAGCAAGAACTTTATTTGGATATCACGAGAGCG
GCTGTGTCTCTAGAATCAATACTGATGCTCAACAATTTAACAAGAAGGTC
AGCTCCGCAGCAACAAATCTTCAAAAGCAACTTCCTGATCTGAAAATTGT
GATTTTCGACATTTTCAAGCCAATCTATGACCTTGTCCAGTCCCCTTCAA
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