CX286823

Overview
NameCX286823
Unique NameCX286823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14
Identity = 56/203 (27.59%), Postives = 91/203 (44.83%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKV--AGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKV--YTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG---CVSRINTDAQQFNKKVSSAATNLQK-QLPDLKIVIFDIFKPIYDL 584
            + Y P Y   +  G+ +L GANFAS  +G  D T   L    S+ QQ++ Y     ++ +     + +    +   I+  G GS D+L NY++    +    Y  + ++  L+  ++  +  +Y  GARK  VT +  +GC+P     +    +    C  +IN     FN +V      L K QL   K V  D +K  YDL
Sbjct:   91 RNYIPPY--SRIRGQAILRGANFASGAAGIRDETGDNLGAHTSMNQQVELYTTAVQQMLRYFRGDTNELQRYLSRCIFYSGMGSNDYLNNYFMPDFYSTSTNYNDKTFAESLIKNYTQQLTRLYQFGARKVIVTGVGQIGCIPYQLARYNNRNNSTGRCNEKINNAIVVFNTQVKKLVDRLNKGQLKGAKFVYLDSYKSTYDL 291          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14
Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 3
Query:   57 IGANFASAGSGYDDRTSY-LNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 566
            IG N+AS   G  + TS  +   ISL QQ+  +       + +  +    S ++  +Y +  GS D+L NY+++P  L  +++ P+QY+  L++++  ++  +Y LGAR   +  +  +GC P      G   +GC   +N     FN K+ +  T+   + P       D+F
Sbjct:  106 IGLNYASGAGGIREETSENMGERISLRQQVNNH------FSAIITAAVPLSRLRQCLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGCTPRIVATLG-GGTGCAEEVNQAVIIFNTKLKALVTDFNNK-PGAMFTYVDLF 270          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.030e-13
Identity = 47/195 (24.10%), Postives = 82/195 (42.05%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            P  L P         G +FASAG+G     S+L   I+L  QL  +++ +  L    G  ++  +   A+Y+   G+ D+   +  N    K  + E++   ++   +  I+ +Y +G RKFG  ++ P  C P +          C   +       NKK       LQ+QL   +  + D    + + + SPS
Sbjct:   90 PPNLQPNNGNNQFTYGVSFASAGAGALAE-SFLGMVINLGTQLNNFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYECSPNSLIRDRTKIGSCFKPVAELIDMHNKKFPDVLRRLQRQLSGFRYALHDYHTSLSERINSPS 283          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.030e-13
Identity = 53/196 (27.04%), Postives = 88/196 (44.90%), Query Frame = 3
Query:   15 PAYLSPQATGKNLL-IGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            PAYL P + GKN    G +FASAG+G    T +    I+L  QL  +++ +  L    G  Q   +I  A+Y+   G  D+   +  N  + +    E Y   +V   ++ IK +Y +G RKFG  ++    C PA+  +       C   +       N+K+ S    L+++L   K  + D    +   + +PS
Sbjct:  101 PAYLQP-SNGKNQFPYGVSFASAGAGALVGT-FPGMVINLKSQLNNFKKVEKLLRSTLGEAQGKMVISRAVYLFHIGVNDYQYPFSTNSSIFQSSPQEIYVDFVVGNTTAVIKEVYKIGGRKFGFLNMGAYDCAPASLIIDQTKIGTCFKPVTELINLHNEKLESGLRRLERELSGFKYALHDYHTSLSVRMNNPS 294          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.294e-13
Identity = 48/195 (24.62%), Postives = 80/195 (41.03%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            P  L P         G NFAS G+G    T +    I+L  QL  +++ +  L    G  +   +I  A+Y+   G  D+   +  N  L +  + E+Y   +V   +   K +Y LG RKFG+ +  P  C PA+  +       C   +       N+K+ +    L  +L   K  + D    + + +  PS
Sbjct:   99 PPNLQPFNGNSQFAYGVNFASGGAGALVGT-FSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIRSCFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPS 292          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13
Identity = 63/207 (30.43%), Postives = 94/207 (45.41%), Query Frame = 3
Query:   21 YLSP--QATGKNLLIGANFASAGSGYDDRTSYLN-----HAISLTQQLQYYREY--QSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSM---LVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHE---SGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            YLSP   + G N   GA+FA+AGS     T+ +          L  Q   +R++  +S+  +  G   +  + ++  +     + D  QN      LN   T E+ ++    LVN FS+ +K +Y LGAR F + +  P+GCL    T F + E   +GC    N  AQ FN K+      L+K LP    V  DI+   Y L   P
Sbjct:   89 YLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLN--LTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFPWAEKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEP 293          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13
Identity = 62/210 (29.52%), Postives = 94/210 (44.76%), Query Frame = 3
Query:    9 YAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA----ISLTQQ-LQYYREY-QSKLAKVAGSKQSASI-----IKDAIYIVGSGSGDFLQNYYVNPLLNKVYT--PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-----GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDL 584
            Y  A+L   + G N   GANFA+AGS      S L  +     SL  Q +Q+Y  + +S+  +  G      +        A+Y    G  D    Y+ N  + +V T  PE     +++ F + IKN+YG G R F + +  P+GCL      F      +   GCVS +N  AQQFN  +  A   L+  L +  I   D++   ++L
Sbjct:   85 YLSAFLD--SVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPE-----IISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHEL 287          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12
Identity = 53/193 (27.46%), Postives = 94/193 (48.70%), Query Frame = 3
Query:   42 GKNLLIGANFASAGSGYDDRTSYLNHAISLT-QQLQYYREYQSKLAKVAGSKQSASI----IKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFS---SFIKNMYGLGARKFGVTSLPPLGCLPAARTLF---GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLV 587
            G     GANFA  GS    R  Y+  A+++   Q  +++    +LA ++   +   I     ++A+Y++  G  D   ++      +K  +  +   ++ N+ S   S IK +Y  G RKF V +  PLGCLP   ++    G+ + GC++  N  A+ FN+ +     +L+ +L +  IV  DI+   YDL+
Sbjct:  103 GSKFQNGANFAIVGSSTLPR--YVPFALNIQLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMIDIGQNDIADSF------SKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGCLPQKLSMVHSKGFDKHGCLATYNAAAKLFNEGLDHMCRDLRTELKEANIVYVDIYAIKYDLI 287          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12
Identity = 46/163 (28.22%), Postives = 81/163 (49.69%), Query Frame = 3
Query:   48 NLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLP 536
            N   G NFASAGSG    T+       +  QLQ ++        V  +    SII+++++++ +GS D   NY++ P      +P+ Y + +++  +  I  +Y LGAR+    SL P+GC+PA   L     + C  ++N  A+ +NK++      +  + P
Sbjct:  107 NFSNGINFASAGSGLLLDTNKFMGVTPIQTQLQQFQTL------VEQNLIEKSIIQESLFLLETGSNDIF-NYFL-PFRAPTLSPDAYVNAMLDQVNKTIDQIYKLGARRIAFFSLGPVGCVPARAMLPNAPTNKCFGKMNVMAKMYNKRLEDIVNIIPTKYP 261          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.644e-11
Identity = 57/216 (26.39%), Postives = 92/216 (42.59%), Query Frame = 3
Query:    9 YAPAYLSPQATGKNLLIGANFASAGSGYDDRTS----YLNHAISLTQQLQYYREYQSKLAKVAGSKQSA---------SIIKDAIYIVGSGSGDFLQNYYVNPLLN-KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFG------YHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            Y  AYL+  + G N   GANFA+ GS    +      Y     SL  Q+  + +++++ A +    +S               A+Y    G  D    +    +   K   P+     +VN  +S ++N+Y  G R F V +  P GCLP      G        +SGCV   N  A +FN+K+     NL+K+L    I   D++   Y+++ +P
Sbjct:   96 YLSAYLN--SLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIPD-----IVNHLASAVRNIYQQGGRTFWVHNTGPFGCLPVNMFYMGTPAPGYLDKSGCVKAQNEMAMEFNRKLKETVINLRKELTQAAITYVDVYTAKYEMMSNP 304          
The following BLAST results are available for this feature:
BLAST of CX286823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDL17_ARATH1.588e-1427.59GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
GDL68_ARATH2.074e-1426.59GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GLIP3_ARATH1.030e-1324.10GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
GLIP2_ARATH1.030e-1327.04GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GLIP1_ARATH2.294e-1324.62GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
EST_HEVBR3.912e-1330.43Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
FUCO3_ARATH5.109e-1329.52Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL2_ARATH4.325e-1227.46GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
GLIP6_ARATH7.378e-1228.22GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GDL76_ARATH1.644e-1126.39GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC01001D12Rv Veg1 Citrus clementina cDNA clone C01001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286823 ID=CX286823; Name=CX286823; organism=Citrus clementina; type=EST; length=600bp
TTAAGACTTATGCGCCAGCATATCTCAGCCCACAGGCTACAGGGAAAAAC
CTCCTTATTGGAGCCAACTTTGCTTCAGCGGGATCTGGTTATGATGACAG
GACATCCTACTTAAATCATGCAATTTCATTGACTCAGCAGTTGCAGTACT
ATAGAGAGTACCAGAGTAAGCTAGCAAAGGTAGCCGGTAGCAAACAATCA
GCTTCCATAATCAAGGATGCGATATACATAGTGGGTTCTGGGAGTGGTGA
CTTTCTTCAGAATTACTATGTCAATCCTTTACTTAACAAAGTCTACACTC
CTGAGCAGTATAGCTCAATGCTTGTCAATATTTTCTCAAGTTTTATTAAG
AACATGTATGGATTGGGGGCAAGAAAATTTGGAGTGACTTCACTGCCACC
ATTGGGTTGCCTTCCAGCAGCAAGAACTTTATTTGGATATCACGAGAGCG
GCTGTGTCTCTAGAATCAATACTGATGCTCAACAATTTAACAAGAAGGTC
AGCTCCGCAGCAACAAATCTTCAAAAGCAACTTCCTGATCTGAAAATTGT
GATTTTCGACATTTTCAAGCCAATCTATGACCTTGTCCAGTCCCCTTCAA
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