CX286831

Overview
NameCX286831
Unique NameCX286831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length517
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 43/167 (25.75%), Postives = 79/167 (47.31%), Query Frame = 1
Query:    1 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERL--DLQGVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLL 489
            NY DI F PY   W+ +RK+    LFS K +   + ++ EE+  +  ++A + ++  PVNL  +     V+ + R       FG    G+   +D F  +V E + + G F+  DF+P +  +   L G+  + ++  +  + F   + +  K   ++G     DLL
Sbjct:  109 NYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRT-----AFGVSFEGTVLNSDRFNKIVREALEMLGSFSAADFIPYVGWIIDVLTGLQGRRERSKRDLNAFFEQMFDLHKEGKKEGNEDFVDLL 270          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 49/184 (26.63%), Postives = 87/184 (47.28%), Query Frame = 1
Query:    1 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL-----NLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERL-DLQGVARKMKKLHKRFDVFLSDILEERKMN----GRDGGNKLTDLLGTLISLMDD 516
            N +DI F PYG  WR +RKI  + + S K++  +  +R +E+  L  ++    T  E VN  +R+     ++   +A G+V+                 + F  ++ E++ LA  F+V D  P+ + L    G  +K+   H++ D  + D+++E K N      D      DL+  L+ LM+D
Sbjct:  111 NRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVL--------------KEQEVFIKLIREVISLAEGFDVADIFPSYKFLHGFGGAKQKLLNAHRKVDSIVEDVIKEHKKNLATRKSDDAIGGEDLVDALVRLMND 280          
BLAST of CX286831 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 1
Query:    1 NYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSMVVELMVLAGVFNVGDFVPALERLDLQGV---ARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLLGTLISLM 510
            N++DI F PYG  WR +RK+S V LFS K L  +R++R+EE  +  + L+   +    VNL + L   V + + R+  G  +        D   D       E ++   +F+  DF P L    ++ +    +++ +L+   D F  +IL++    GR+     +D++  +I +M
Sbjct:  107 NFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEFVDEDSIDDLVHKS--EDVIRNSIFS--DFFPGLMGRLIEWIFSERKRLNRLYSEVDTFFQNILDDHLKPGRES----SDIIDVMIDMM 273          
The following BLAST results are available for this feature:
BLAST of CX286831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
C71BW_ARATH5.888e-1125.75Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH7.691e-1126.63Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BS_ARATH7.691e-1127.43Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC01001E08Rv Veg1 Citrus clementina cDNA clone C01001E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286831 ID=CX286831; Name=CX286831; organism=Citrus clementina; type=EST; length=517bp
AACTATCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCT
GAGGAAGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACT
ACAGGCACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCG
AGTGCAGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGT
TGTGAATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACG
GTACCGGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAATGGTTGTG
GAGCTGATGGTGCTGGCGGGTGTGTTCAACGTCGGTGATTTTGTCCCCGC
CCTTGAGCGGCTAGACTTACAGGGAGTGGCACGTAAAATGAAGAAGCTGC
ACAAAAGATTTGATGTGTTTTTGAGTGATATCTTGGAGGAGCGCAAGATG
AACGGTCGTGACGGAGGGAATAAGCTTACGGACTTGCTGGGTACCTTGAT
TTCGTTGATGGATGATG
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