CX286856

Overview
NameCX286856
Unique NameCX286856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length304
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSEE4 (Probable M18 family aminopeptidase 2 OS=Pseudomonas entomophila (strain L48) GN=apeB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.382e-19
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+L++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGFLQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_AZOVD (Probable M18 family aminopeptidase 2 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=apeB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.382e-19
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R     +G    +L+   +PI  IP LAIHL+R  N
Sbjct:   75 GLRLVGAHTDSPCLRVKPQPELNRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----AGRVESQLIDFKQPIAVIPNLAIHLNREAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_CLOAB (Probable M18 family aminopeptidase 2 OS=Clostridium acetobutylicum GN=apeB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.474e-19
Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = 2
Query:    5 YVAGNGFHVVGAHTDSPCLKLKPVSK-VTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNS 298
            +VA  GF ++G HTDSP  ++KP  + V++  Y+++  + YGG +  TWFDR L++AGRV +R GK    P + KL+ I  PI+ IP LAIH++R+VNS
Sbjct:   72 FVAKKGFKIIGGHTDSPTFRIKPNPEMVSENSYIKLNTEVYGGPILSTWFDRPLSIAGRVTVR-GKSALFPET-KLLNIKRPILVIPNLAIHMNRDVNS 168          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSEPF (Probable M18 family aminopeptidase 2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=apeB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.761e-19
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 2
Query:   17 NGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            +G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   74 DGIRLVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKAPIAIIPNLAIHLNREAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSEU5 (Probable M18 family aminopeptidase 2 OS=Pseudomonas stutzeri (strain A1501) GN=apeB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.275e-18
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 2
Query:    2 KYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            K +A +G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV         G    +L+   +PI  IP LAIHL+R  N
Sbjct:   69 KPLAEHGLRLVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTYSR----DGRIESQLIDFRQPIACIPNLAIHLNREAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSEU2 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apeB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSESM (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. tomato GN=apeB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSEFS (Probable M18 family aminopeptidase 2 OS=Pseudomonas fluorescens (strain SBW25) GN=apeB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   75 GIRLVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAIIPNLAIHLNREAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_PSE14 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=apeB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   20 GFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            G  +VGAHTDSPCL++KP  ++ + G+ ++GV+ YGG L   WFDRDL++AGRV  R      G    +L+    PI  IP LAIHL+R  N
Sbjct:   75 GIRMVGAHTDSPCLRVKPQPELQRQGFWQLGVEVYGGALLAPWFDRDLSLAGRVTFRR----DGKVESQLIDFKLPIAVIPNLAIHLNRTAN 162          
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_CLONN (Probable M18 family aminopeptidase 2 OS=Clostridium novyi (strain NT) GN=apeB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.079e-17
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 2
Query:    5 YVAGNG------FHVVGAHTDSPCLKLKPVSKVT-KGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVN 295
            +V GNG      F ++GAHTDSP  ++KP  ++T +  Y+++  + YGG + +TW DR L VAGRV ++ G++   P + KLV I++PIM IP LAIH++RN+N
Sbjct:   66 FVVGNGEVHEDGFKIIGAHTDSPTFRIKPNPEMTSEQSYIKLNTEVYGGPILNTWIDRPLAVAGRVTLK-GENILFPET-KLVNINKPIMIIPNLAIHMNRNIN 167          
The following BLAST results are available for this feature:
BLAST of CX286856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
APEB_PSEE44.382e-1948.91Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_AZOVD4.382e-1947.83Probable M18 family aminopeptidase 2 OS=Azotobacte... [more]
APEB_CLOAB7.474e-1946.46Probable M18 family aminopeptidase 2 OS=Clostridiu... [more]
APEB_PSEPF9.761e-1947.31Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEU51.275e-1845.92Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEU22.175e-1847.83Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSESM2.175e-1847.83Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEFS2.175e-1847.83Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSE142.175e-1847.83Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_CLONN1.079e-1745.19Probable M18 family aminopeptidase 2 OS=Clostridiu... [more]

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Properties
Property NameValue
Genbank descriptionC01001G11Rv Veg1 Citrus clementina cDNA clone C01001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286856 ID=CX286856; Name=CX286856; organism=Citrus clementina; type=EST; length=304bp
AAAATATGTTGCTGGGAATGGATTCCATGTAGTCGGTGCTCATACTGACA
GTCCTTGCCTAAAGCTGAAGCCTGTTTCTAAGGTAACAAAAGGTGGGTAT
TTGGAGGTTGGCGTCCAAACATATGGAGGTGGTTTGTGGCATACGTGGTT
CGACCGTGACTTGACAGTTGCAGGAAGGGTGATAATTAGAGAAGGGAAAG
ATGGTTCTGGTCCCTATTCTCATAAACTAGTTAGAATTGACGAACCCATA
ATGCGAATTCCTACACTGGCAATTCACTTGGACAGGAATGTTAATTCTGA
TGGA
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