CX286856

Overview
NameCX286856
Unique NameCX286856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length304
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCBT (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=apeB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K        G+  V +Q YGG   H+W DRDL ++GR+ +R   DG+G  SH+LVRID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVR---DGTG-VSHRLVRIDDPILRVPQLAIHL 154
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCBP (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=apeB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K        G+  V +Q YGG   H+W DRDL ++GR+ +R   DG+G  SH+LVRID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVR---DGTG-VSHRLVRIDDPILRVPQLAIHL 154
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCBO (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis GN=apeB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K        G+  V +Q YGG   H+W DRDL ++GR+ +R   DG+G  SH+LVRID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVR---DGTG-VSHRLVRIDDPILRVPQLAIHL 154
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCTU (Probable M18 family aminopeptidase 2 OS=Mycobacterium tuberculosis GN=apeB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.136e-17
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K        G+  V +Q YGG   H+W DRDL ++GR+ +R   DG+G  SH+LV ID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVR---DGTG-VSHRLVLIDDPILRVPQLAIHL 154
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCTA (Probable M18 family aminopeptidase 2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=apeB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.136e-17
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K        G+  V +Q YGG   H+W DRDL ++GR+ +R   DG+G  SH+LV ID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDRLVAGWHVVALQPYGGVWLHSWLDRDLGISGRLSVR---DGTG-VSHRLVLIDDPILRVPQLAIHL 154
[Close]
BLAST of CX286856 vs. ExPASy Swiss-Prot
Match: APEB_MYCLE (Probable M18 family aminopeptidase 2 OS=Mycobacterium leprae GN=apeB PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.558e-16
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 2 
Query:   23 FHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHL 280
            F +VGAHTDSP L++K    +   G+  V +Q YGG   ++W DRDL V+GR+ +R    GS   + +LVRID+PI+R+P LAIHL
Sbjct:   73 FRIVGAHTDSPNLRVKQHPDLLVAGWRVVALQPYGGAWLNSWLDRDLGVSGRLSVRSAGKGS-EITDRLVRIDDPILRVPQLAIHL 157
The following BLAST results are available for this feature:
BLAST of CX286856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
APEB_MYCBT1.410e-1752.33Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCBP1.410e-1752.33Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCBO1.410e-1752.33Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCTU9.136e-1751.16Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCTA9.136e-1751.16Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCLE1.558e-1648.84Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]

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Properties
Property NameValue
Genbank descriptionC01001G11Rv Veg1 Citrus clementina cDNA clone C01001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286856 ID=CX286856; Name=CX286856; organism=Citrus clementina; type=EST; length=304bp
AAAATATGTTGCTGGGAATGGATTCCATGTAGTCGGTGCTCATACTGACA
GTCCTTGCCTAAAGCTGAAGCCTGTTTCTAAGGTAACAAAAGGTGGGTAT
TTGGAGGTTGGCGTCCAAACATATGGAGGTGGTTTGTGGCATACGTGGTT
CGACCGTGACTTGACAGTTGCAGGAAGGGTGATAATTAGAGAAGGGAAAG
ATGGTTCTGGTCCCTATTCTCATAAACTAGTTAGAATTGACGAACCCATA
ATGCGAATTCCTACACTGGCAATTCACTTGGACAGGAATGTTAATTCTGA
TGGA
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