CX286896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.822e-18 Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSS-QKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 LGGR AEE++F +++TTGA+ND + + +A QMV +G SK +G +A N FLGQ M + ++ S TA +D EV+E+VE + +A I+ + D+L +A+ ++EKE ++GEE L Sbjct: 495 LGGRAAEEIVF--DSITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHL 616
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.380e-18 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLF 375 LGGR AEEV FG++ +TTGA ND + + +A +MV +G S K+G +AI NPFLG M++ D S +D EV+ ++ Y +AK I+ + + L + + L+EKET+ EEF+ +F Sbjct: 474 LGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRV-ANPFLG-GMTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF 595
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.301e-18 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 +GGRVAEE+IFG+ VT+GAS+DF Q + VAR MV ++G SK++G V+ G+ MS++ T +++ EV+ VE AY AK I+ H LH LA L+E ET+ G + ++ Sbjct: 545 MGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEKEVKCFVENAYNNAKNILIKHNKELHALANALLEHETLTGAQIKNI 657
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.043e-18 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 +GGRVAEE+IF + TTGASNDF Q +++AR MV +G S+K+G V G + LG Q S QK S TA +D EVR L+ A +A +II ++ + +A+ L++ ET+D + +L+ GK Sbjct: 505 MGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 9.043e-18 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 +GGRVAEE+IF + TTGASNDF Q +++AR MV +G S+K+G V G + LG Q S QK S TA +D EVR L+ A +A +II ++ + +A+ L++ ET+D + +L+ GK Sbjct: 505 MGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.181e-17 Identity = 49/124 (39.52%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 ++ GRVAEE+IFG+ VT+GAS+DF +++AR MV ++G SK++G V+ G+ MS++ T +++ EV+ L+E AY AK I+T H H LAQ L+E ET+ G + + Sbjct: 537 SMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKKI 650
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17 Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 ++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G + G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 596 SMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17 Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 ++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G + G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 596 SMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17 Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 1 ALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 387 ++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G + G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 654 SMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768
BLAST of CX286896 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.488e-17 Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 4 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 372 LGGR AE+VIFGE +TTGA+ D QV+ +ARQMV FG S +IG A+ P + +M ++ S A+ +D+ V++++ AY AK+ + + + + KL +L+EKET+ G+EF ++ Sbjct: 541 LGGRAAEDVIFGEPEITTGAAGDLQQVTEIARQMVTMFGMS-EIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAI 663 The following BLAST results are available for this feature:
BLAST of CX286896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286896 ID=CX286896; Name=CX286896; organism=Citrus clementina; type=EST; length=475bpback to top |