CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.442e-45 Identity = 80/162 (49.38%), Postives = 120/162 (74.07%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF 569 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+GNK D + + V + + A E G+ F ETSA +N++++F Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.442e-45 Identity = 80/162 (49.38%), Postives = 120/162 (74.07%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF 569 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+GNK D + + V + + A E G+ F ETSA +N++++F Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.108e-45 Identity = 87/169 (51.48%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R V +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++++ ++ +L+GNK DL + V + +AFA E G+ F+ETSAK A NVE+A++ A EI +K+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKI 171
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.108e-45 Identity = 80/162 (49.38%), Postives = 120/162 (74.07%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF 569 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+GNK D + + V + + A E G+ F ETSA +N++++F Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESF 162
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 180.259 bits (456), Expect = 7.108e-45 Identity = 91/184 (49.46%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEI-----KKKMGNQPTA 620 + EYDYLFK++LIGDS VGKS +L RF + + STIGV+F RT +++GKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+T+ ++F+NV +WL E+ +A+ ++ ++ GNK DL + V + ++ A++ G+ FLETSA +A NVE+AF T+ GEI KK + Q A Sbjct: 5 VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAA 188
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 3 Query: 90 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 +EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ + ++ NV++WL E+ +A+ ++ +LVGNK DL + V T A+AFA++ + F+ETSA D+ NVE+AF + EI + + + A+ Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 3 Query: 90 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 +EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ + ++ NV++WL E+ +A+ ++ +LVGNK DL + V T A+AFA++ + F+ETSA D+ NVE+AF + EI + + + A+ Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 3 Query: 90 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 +EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ + ++ NV++WL E+ +A+ ++ +LVGNK DL + V T A+AFA++ + F+ETSA D+ NVE+AF + EI + + + A+ Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 3 Query: 90 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 +EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ + ++ NV++WL E+ +A+ ++ +LVGNK DL + V T A+AFA++ + F+ETSA D+ NVE+AF + EI + + + A+ Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 82/173 (47.40%), Postives = 124/173 (71.68%), Query Frame = 3 Query: 75 SKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELG-IPFLETSAKDAINVEQAFLTMAGEI 590 ++ +DYLFK++LIGDS+VGK+C++ F Y ++ +TIGVDF +R++++DGK +K+Q+WDTAGQERFRTIT SYYR AH II YD+T +F ++ W++EI++Y +V +L+GNKCDL E + V + A A++ G + LETSAK++ N+E+ F+ MA E+ Sbjct: 7 ARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |