CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.853e-77 Identity = 141/180 (78.33%), Postives = 158/180 (87.78%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKT+KLQIWDTAGQERFRTITSSYYRGAHGI +VYDVT+M+SFNNVKQWL EIDRYA + V KLLVGNK D+ + KVV+ AK FAD LGIPFLETSAK+A NVEQAFLTMA +IK++MG+ N Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATN 180
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.853e-77 Identity = 143/174 (82.18%), Postives = 156/174 (89.66%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMG 605 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQER RTITSSYYRGAHGII+VYDVT+ ES+ NVKQWL EIDRYA+++V KLLVGNK DL KVVD TAK FAD LGIPFLETSAK+A NVEQAF+TMA EIKK+MG Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 174
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 9.197e-77 Identity = 141/179 (78.77%), Postives = 157/179 (87.71%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL+EIDRYA ++V KLLVGNK DL +VV T AK FA+ LGI FLETSAK+A NVE+AF+ MA +IKK+M N P A Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVA 179
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 286.189 bits (731), Expect = 9.197e-77 Identity = 141/181 (77.90%), Postives = 156/181 (86.19%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN-QPTAN 623 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ LDGK IKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ SFNNVKQW+ EI RYA DSV +LLVGNKCDL+E K+VDT TA+ +AD +GIPFLETSAK + NVEQAF+ MA EIKK G QP N Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNN 181
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 2.676e-76 Identity = 140/180 (77.78%), Postives = 158/180 (87.78%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT EL+GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVT+ +SFNNVKQWL EIDRYA + V +LLVGNK D+V+ KVV+ AK FAD L IPFLETSAKD+ NVEQAFLTM+ +IK++MGN A+ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 1.243e-73 Identity = 137/174 (78.74%), Postives = 152/174 (87.36%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMG 605 M+ YD LFKLLLIGDS VGKSCLLLRFADD Y +SYISTIGVDFKI+T+ELDGKTIKLQIWDTAGQERF TITSSYYRGAHG ++VYDVT+ ES+ NVKQWL EIDR+A+++V KLLVGNK DL KVVD TAK FAD LGIPFLETSAK+A NVEQAF+TMA EIKK+MG Sbjct: 1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMG 174
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 2.344e-72 Identity = 137/179 (76.54%), Postives = 156/179 (87.15%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM-GNQPT 617 M+ +Y YLFKLLLIGDS VGKSCLLLRFADD+Y +S+ISTIGVDFKIRT+EL+GKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ +F NV+QWL EIDR+A ++V KLLVGNK DLV KVVD TAKAFAD L IPFLETSAK + NVEQAF+TMA EIK ++ +QPT Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPT 179
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 6.821e-72 Identity = 132/176 (75.00%), Postives = 150/176 (85.23%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQ 611 M++EYDYLFKLLLIG+S VGKSCLLLRF+DD+Y + YISTIGVDFKI+TVELDGKT+KLQIWDTAGQERFRTITSSYYRG+HGIIIVYDVT+ ESFN VK WL EIDRYA +V KLLVGNKCDL + +VV+ AK FAD +PFLETSA D+ NVE AFLTMA +IK+ M Q Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQ 176
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.572e-68 Identity = 124/175 (70.86%), Postives = 151/175 (86.29%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 M+ E+D+ FK+LLIGDS VGKSCLLLRFADDS+ D++ISTIGVDFKI+T+ LDGKTIKLQIWDTAGQERFRTITSSYYRGA GII+VYD T+ +SF NVKQW+ EIDRYA ++V KLLVGNK DLV KVVD+ AK+FA+ GIPF+ETSAK+A NVE+ F++MA +IK ++ + Sbjct: 3 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD 177
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.593e-66 Identity = 117/181 (64.64%), Postives = 152/181 (83.98%), Query Frame = 3 Query: 72 PSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQP 614 P+ S YDYL KLLLIGDS VGKSCLLLRF++DS+ S+I+TIG+DFKIRT+EL+GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVT+ +SF N++ W+ I+++A DSV K+L+GNKCD+ E KVVD+ K+ ADE GI FLETSAK++INVE+AF+++A +IKK+M + P Sbjct: 4 PATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP 184 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |