CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50 Identity = 94/182 (51.65%), Postives = 132/182 (72.53%), Query Frame = 3 Query: 60 DSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 DS K S++ +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 6 DSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49 Identity = 94/184 (51.09%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +QD+ K S++ +DY+FKLL+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +L GNKCD+ + +VV T+ + ++LG F ETSAKD INV+Q F + I KM Sbjct: 12 AQDARFGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKM 195
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49 Identity = 94/184 (51.09%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +QD+ K S++ +DY+FKLL+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +L GNKCD+ + +VV T+ + ++LG F ETSAKD INV+Q F + I KM Sbjct: 12 AQDARFGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKM 195
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49 Identity = 90/169 (53.25%), Postives = 126/169 (74.56%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +DY+FK+L+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++T+ + K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ LLVGNKCD+ + +VV ++ + AD LG F E SAKD INV+Q F + I +KM Sbjct: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.642e-49 Identity = 93/174 (53.45%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 105 LFKLLLIGDSSVGKSCLLLRFAD-DSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM--GNQPT 617 +FK+LLIGDS+VGK+ LLLRF D +++ ++ ++ VD+K + + +DG+T LQIWDTAGQERFRTITSS+YRGAHG+++ YDVT+ ++NNV W+ EI RY V ++LVGNKCDL + K+V+ A+ +AD LGIPF+ETSA +NVE+AF+ MA EI + G++P+ Sbjct: 6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPS 179
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.757e-49 Identity = 88/176 (50.00%), Postives = 129/176 (73.30%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 +DY+FKLL+IG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YDVT +SFN+V+ W+ +I Y+ D+ +LVGNKCD+ + +V+ + + AD+LG+ F ETSAK+ +NV+ F + I KM A+ Sbjct: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDAD 193
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.212e-49 Identity = 89/193 (46.11%), Postives = 139/193 (72.02%), Query Frame = 3 Query: 45 NGPSQDSLLPSKIMSNE-YDYLFKLLLIGDSSVGKSCLLLRFADDSYV-DSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPT 617 NGP Q S+ PS + + YD FK++L+GDS VGK+CLL+RF D +++ ++IST+G+DF+ + +++DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T +SF+N++ WL EI YA V +L+GNK D +++VV + + A E G+PF+ETSA+ +NV+ AF +A E+K++ P+ Sbjct: 47 NGPPQ-SIRPSLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.114e-49 Identity = 89/171 (52.05%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 +DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ E +VV T+ + A++LG F E SAK+ I+V QAF + I KM + Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 189
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.114e-49 Identity = 89/171 (52.05%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 +DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ E +VV T+ + A++LG F E SAK+ I+V QAF + I KM + Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 189
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.114e-49 Identity = 89/171 (52.05%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 +DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ E +VV T+ + A++LG F E SAK+ I+V QAF + I KM + Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 189 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |