CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.060e-48 Identity = 88/171 (51.46%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 +DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ E +V+ T+ + A++LG F E SAK+ I+V QAF + I KM + Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 189
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.060e-48 Identity = 89/171 (52.05%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGN 608 +DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN V+ W +I Y+ D+ +LVGNKCD+ E +VV T+ + A++LG F E SAK+ I+V QAF + I KM + Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 189
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.384e-48 Identity = 87/192 (45.31%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 45 NGPSQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYV-DSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPT 617 NGP Q + YD FK++L+GDS VGK+CLL+RF D +++ ++IST+G+DF+ + +++DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T +SF+N++ WL EI YA V +L+GNK D + +VV + + A E G+PF+ETSAK +NV+ AF +A E+K++ P+ Sbjct: 44 NGPPQSGRPSLGGTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.808e-48 Identity = 91/183 (49.73%), Postives = 125/183 (68.31%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 S+ P +DY+FKLLLIG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ ESF V+ W +I Y+ D+ +LVGNKCDL + +VV + + AD+LG F E SAK+ INV+Q F + I KM Sbjct: 5 SEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.808e-48 Identity = 90/177 (50.85%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 72 PSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 P +DY+FKLLLIG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ ESF V+ W +I Y+ D+ +LVGNKCDL + +VV + + AD+LG F E SAK+ INV+Q F + I +KM Sbjct: 11 PRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48 Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R + +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN ++ +L+GNKCDL + V T+ + FA E G+ FLETSA+ A NVE+AF+ A EI KK+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKI 171
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.869e-48 Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R + +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN ++ +L+GNKCDL + V T+ + FA E G+ FLETSA+ A NVE+AF+ A EI KK+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKI 171
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.172e-47 Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 3 Query: 54 SQDSLLPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 S+ P +DY+FKLLLIG+SSVGK+ L R+ADDS+ +++ST+G+DFK++TV K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ ESF V+ W +I Y+ D+ +LVGNKCDL + +VV + + A +LG F E SAK+ INV+Q F + I KM Sbjct: 5 SEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKM 187
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.998e-47 Identity = 95/174 (54.60%), Postives = 126/174 (72.41%), Query Frame = 3 Query: 90 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQ 611 +EYDYLFK +LIGDS VGKS LL+RF + + STIGV+F R + LD K IK QIWDTAGQER+R ITS+YYRGA G +IVYD+T+ SF+NV +WL E+ +A+ ++ +LVGNK DL+ + V T+ A+AFA E + F+ETSA DA NVE+AF T+ EI + + N+ Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNR 178
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.998e-47 Identity = 87/169 (51.48%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 96 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM 602 +DY+FKLL+IG+SSVGK+ L R+ DDS+ +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T ESFN+V+ W +I Y+ ++ +LVGNKCD+ +VV + AD+LG+ F ETSAK+ INV+ F + I KM Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKM 187 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |