CX287113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 7.465e-13 Identity = 45/161 (27.95%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 16 QRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRL-KSIGMIDS-VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 + LDE G+ + D + + TST+ S+ + +K+FN ++ ED++++ + G+V NW+ V M +DP + A+ V+ + GHD +++ + D + G +++ + E A++ TRE+ P + V GM + GAPRMGP Sbjct: 81 REILDEFGIRSEPYDEGYHVADSVEATSTLCSRA-CQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEIVKVVERKIGPELNTPDGRIQGERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGP 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.749e-13 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 1 Query: 22 FLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKA-------------LDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 +L E ++Y ++D ++V+ A+ ++ M + +FN V EDL++ R+ GVV NW + +DP + AK V GH A V+ L G+I+SV G +D E +V T+EI PG+ V GM + G PRMGP Sbjct: 83 YLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINWMPTIKE---KLHVDPITVVAKFTVDGTGHP----ANLVRLLSKRGIINSVKGSSENLCSCGVVEYEFPMDAENGEKFVVENTKEIYPGLYVMGMAAVSVGGGPRMGP 243
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12 Identity = 50/166 (30.12%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 10 PAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 PA L E+GV+ + + V + ++ F M+KL A K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE V + E+ PG+ GM V I PRMGP Sbjct: 82 PADEILREIGVKLQKFEEGVYVVDSSEF----MAKLAAATIDAGAKIIHGVTVDDVIFRENPLRVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGP 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.172e-12 Identity = 51/166 (30.72%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDS-VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 +K A R LDE + Y E ++ Y V + + A +L N V+ ED++++ G R+ G+V NW M +DP + A++V+ GHD K++ + +S V G K + E +V TRE+ PG+IV GM + PRMGP Sbjct: 77 QKEACRILDEYDIWYREFEEGYYVADSIEVVAKLTAGAIDA--GAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAALGEKIVVDATREVYPGLIVAGMAATTVAAGPRMGP 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.837e-12 Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 10 PAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 PA L E+ ++ ++ + V I +A F + + + + K+ + V +D+I + +V GV W M +DP + AK VV + GHD + +++ + ++ +PG K+ TAE+ V T + PG+ GM V + G PRMGP Sbjct: 87 PADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGP 243
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.837e-12 Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDS---------------------------VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGPT 495 R PAQ L++L V++ QD+ + + + K K+ N D++++ RVGG+V NW V +C+DP +EA +V+ + GHD A V +L+ G++++ PG ++ + +EDA+V T G+IVTGM A G PRMGPT Sbjct: 84 RDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHD----AVAVSKLQERGVLNAPGIEHADEHNTGMDQTGDDSYGAPGHDSPGHDSMWVGQSEDAVVEHTGLAHEGLIVTGMATATTYGLPRMGPT 272
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.837e-12 Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A R LD+ G+ Y E Q Y V I A ++FN V+ ED++++ RV G+V NW V++ + +DP ++ K+V+ GH+ T ++++ + IG + + G K + E +V T+EI PG+IV GM +PRMGP Sbjct: 77 QEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGNLGKL-GEKPMWSEVGEQLVVDATKEIYPGLIVAGMAANAATCSPRMGP 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.838e-12 Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMG 489 KPA L E G++ DE VI LFT+ + +KL K+ + EDLI+K +V GVV + +DP + AK V+ S GHD T ++ K +G+ VPG K++ + E+++ R TRE+ PG+ V GM RMG Sbjct: 82 KPADEILREAGIKLDE-----VIGEPELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKVSGVVIQSYSIEK---AGLHIDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMG 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12 Identity = 46/164 (28.05%), Postives = 76/164 (46.34%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 KPA L E+ V E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ + G K+ AE+ V T ++ G+ GM V + G PRMGP Sbjct: 83 KPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGP 240
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12 Identity = 47/166 (28.31%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A R LD+ G+ Y E ++ + ++ +++ + ++FN V+ ED++++ RV G+V NW V+ + +DP ++ K+V+ GH+ T ++++ + IG + + G K + E V T+EI PG+IV GM APRMGP Sbjct: 77 QEEATRILDDFGIRYKEYESGYYVANSVESVGKLIAGATSA-GAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGP 237 The following BLAST results are available for this feature:
BLAST of CX287113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287113 ID=CX287113; Name=CX287113; organism=Citrus clementina; type=EST; length=496bpback to top |