CX287113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12 Identity = 52/166 (31.33%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 4 RKPAQRFLD--ELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDS--VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMG 489 +K A LD E+G +D Y A+ T T + A+ V +FN V ED++++ R+ G+V NW+ V M +DP M A V+ + GH K++ DS + G K++ + AE + TRE+ PG+ V GM G PRMG Sbjct: 77 QKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATGHATEVVHVVAKKVPGTLRTDSGKIEGEKSMWSDRAESLTLENTREVYPGLYVAGMAGNATFGGPRMG 236
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.253e-12 Identity = 44/165 (26.67%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID-SVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A LDE G+ Y E +N + ++ ++S + ++FN V ED++++ + G+V NW V + + +DP + +K+VV GH +T +++ + + V G K + + E ++ T+E+ P + V GM + GAPRMGP Sbjct: 77 QEDALHILDEFGISYHEYENGYYVANSIESVGKLISGATSA-GAEIFNLVNVEDVMIRENDEICGLVINWTAVEIG---KLHVDPLAIRSKVVVDGTGHPAVVCSTVQRKVPGAKLGELGVVGEKPMWADVGEKMLLDTTKEVYPNLYVAGMAANAVAGAPRMGP 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.253e-12 Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGGRVG--GVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 + A+ LD+ G+ Y E N++V A M+KL A+ K+ + V+ ED+I + +G GV W+ V ++ +DP + ++ VV + GHD + ++ I + SV G ++ AE IV T +IV G+ GM VA + PRMGP Sbjct: 83 REAKDILDDFGIRYTEHRNFLVADSAEF-----MAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEISG---LHVDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKIVKGLYAAGMAVAAVHNLPRMGP 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.078e-11 Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMG 489 KPA L E G++ DE D LFT+ + +KL K+ + EDLI+K ++ GVV + +DP + AK V+ S GHD T ++ K +G+ VPG K++ E+++ R TREI PG+ V GM RMG Sbjct: 82 KPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMG 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.078e-11 Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMG 489 KPA L E G++ DE D LFT+ + +KL K+ + EDLI+K ++ GVV + +DP + AK V+ S GHD T ++ K +G+ VPG K++ E+++ R TREI PG+ V GM RMG Sbjct: 82 KPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMG 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID-SVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A R LD+ G+ Y E + + ++ +++ + ++FN V+ ED++++ RV G+V NW V+ + +DP ++ K+V+ GHD T ++++ + + + + G K + E V T+EI PG+IV GM APRMGP Sbjct: 77 QEEACRVLDDFGIRYKEYEPGYFVANSVESVGKLIAGATSA-GAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGP 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMG 489 KPA L E G++ DE D LFT+ + +KL K+ + EDLI+K ++ GVV + +DP + AK V+ S GHD T ++ K +G+ VPG K++ E+++ R TREI PG+ V GM RMG Sbjct: 82 KPADDILREAGIKLDEVDG-----EEELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMG 238
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_PYRAR (Putative thiazole biosynthetic enzyme OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1498 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.987e-11 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 136 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 K+ V +D+I +G RV G++ W + M+ +DP AK V+ + GHD + +++ +G+ +PG K+ +E +V T ++ PG+ VTGM VA + G PRMGP Sbjct: 117 KIILGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTMAKAVIDATGHDAEVISVAARKVPELGI--QLPGEKSAWSEVSEKLVVEYTGKVAPGLYVTGMAVAAVHGLPRMGP 232 The following BLAST results are available for this feature:
BLAST of CX287113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287113 ID=CX287113; Name=CX287113; organism=Citrus clementina; type=EST; length=496bpback to top |