CX287114

Overview
NameCX287114
Unique NameCX287114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 5.866e-28
Identity = 71/175 (40.57%), Postives = 103/175 (58.86%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQ-EGFWNTLLPRLVKAIEDTGDNILL-FETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  I  L+  G+ LP +   E    +   +L+K +   G + LL F  P+ +  ++  W  DEEF+R+ LAGLNP  IR +TE+P KSTLDP  YG   S IT   IEK + G +SV++A+   +L+ILD+HD F+P++  +  L     Y +RT+ FL    TL+P+AIEL
Sbjct:  296 FDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPDIIKENEVAWRTDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSKYGDQTSTITPAHIEKNLEG-LSVQQALDSNRLYILDHHDHFMPFLIDINSLDGIFTYATRTLLFLRDDDTLKPLAIEL 469          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.001e-27
Identity = 69/175 (39.43%), Postives = 103/175 (58.86%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDTG-DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  I  L+  G+ LP +          P +L+K +   G D++L    P  +  +K  W  DEEF+R+ LAG+NP  I  +TE+P KS+LDP  +G   S IT E IEK + G ++V++A++  +L+ILD+HD F+P++  V  L    +Y +RT+FFL   G L P+AIEL
Sbjct:  294 FDSFQDIINLYEGGIKLPKVAALEELRKQFPLQLIKDLLPVGGDSLLKLPVPHIIQENKQAWRTDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEG-LTVQQALESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIEL 467          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.307e-27
Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  +  L+  G+ LP  PL +       L  + + +   G+ IL F TP  +   K  W  DEEF+R+ LAG+NP  I  + E+P KS LDPE YG   S IT E IE ++ G ++V+EA+   KLFIL++HD+ +PY+ ++     T  Y SRT+ FL   G+L+P+AIEL
Sbjct:  301 FDSFEDVLRLYEGGIKLPQGPLFKALTAAIPLEMIRELLRTDGEGILRFPTPLVIKDSKTAWRTDEEFAREMLAGVNPVIISRLQEFPPKSKLDPEAYGNQNSTITAEHIEDKLDG-LTVDEAMNNNKLFILNHHDVIIPYLRRI-NTTITKAYASRTLLFLQDNGSLKPLAIEL 473          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.707e-27
Identity = 69/173 (39.88%), Postives = 101/173 (58.38%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  +  L++ G+ LP         + LP L +     G+  L F  P+ +   K  W  DEEF+R+ LAG+NP  IR + E+P +S LD ++YG   S IT E +E  + G ++V+EAI+ K+LF+L +HD  +PY+ ++    ST  Y +RTI FL   GTLRP+AIEL
Sbjct:  301 FDSFDEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKEFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKRLFLLGHHDPIMPYLRRI-NATSTKAYATRTILFLKNDGTLRPLAIEL 469          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27
Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  +  L   G+ LP        +T++P  +VK +  T G+ +L F  P  +   K  W  DEEF+R+ +AG+NP  IR + E+P KS LDP IYG   S IT + ++ +     +V+EA+  ++LF+LDYHD+F+PY+ ++ Q  +   Y +RTI FL   GTL+P+AIEL
Sbjct:  312 FDSFQDVRDLHEGGIKLPT----EVISTIMPLPVVKELFRTDGEQVLKFPPPHVIQVSKSAWMTDEEFAREMVAGVNPCVIRGLQEFPPKSNLDPTIYGEQTSKITADALDLD---GYTVDEALASRRLFMLDYHDVFMPYIRRINQTYAKA-YATRTILFLRENGTLKPVAIEL 478          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.445e-26
Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  I  L+  G+ LP +          P +LVK  +   GD IL    P+ + +DK  W  DEEF+R+ LAG+NP  I  +TE+P KS+LDP  +G   S IT   I   + G ++V++A+   +L+ILD+HD F+P++  V  L+   +Y +RT+FFL   GTL P+AIEL
Sbjct:  299 FDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLDPSKFGDHTSMITAAHIGSNLEG-LTVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFIYATRTLFFLRGDGTLAPLAIEL 472          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26
Identity = 69/175 (39.43%), Postives = 101/175 (57.71%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  +  L+  G+ LP   L Q     + LP L +     G+N L +  P+ +   +  W  DEEF+R+ LAG+NP  I  + E+P +S LD +IYG   S I+ E +E  + G ++VEEAI+ KKLF+LD+HD  +PY+ ++    ST  Y +RTI FL     L+P+AIEL
Sbjct:  305 FDSFDEVHGLYEGGIKLPTNILSQI----SPLPVLKEIFRTDGENTLKYPPPKVIQVSRSGWMTDEEFAREMLAGVNPNVICCLQEFPPRSKLDSQIYGDHTSKISKEHLEPNLEG-LTVEEAIQNKKLFLLDHHDSIMPYLRRINS-TSTKAYATRTILFLNNNQNLKPLAIEL 473          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.490e-26
Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  + +L++ G+ LP         + +P   +     G+  L F  P+ +  D   W  DEEF+R+ +AG+NP+ I+ +  +P+KS LD ++YG   S IT E +E  +GG ++VE AI+  +LF  D+HD   PY+ K+    +T  Y +RT+ FL   GTL+P+AIEL
Sbjct:  309 FNTFEDVRSLYDGGIKLPTDVLSKI--SPIPLFSELFRSDGEAALKFPPPKVIQVDHSAWMTDEEFAREMIAGVNPHIIKEVLSFPIKSKLDSQLYGDNTSKITKEHLEPNLGG-VTVEGAIQTNRLFTPDHHDALFPYLRKI-NATATKAYATRTVLFLQDNGTLKPLAIEL 477          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.086e-25
Identity = 70/175 (40.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR-LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  +  LF  G+ LP        +TL P  +VK I  T G+ +L F  P  +   K  W  DEEF+R+ LAG+NP  IR + E+P KS LDP  YG   S I+ +++  +     +++EA+   +LFILDYHD F+P++ ++ +  S   Y +RTI FL   GTL+P+AIEL
Sbjct:  309 FDSFQDVRNLFEGGIKLPL----DVISTLSPLPVVKEIFRTDGEQVLKFTPPHVIRVSKSAWMTDEEFAREMLAGVNPCMIRGLQEFPPKSNLDPAEYGDHTSKISVDVLNLD---GCTIDEALASGRLFILDYHDTFIPFLRRINE-TSAKAYATRTILFLKENGTLKPVAIEL 475          
BLAST of CX287114 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.725e-25
Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 1
Query:   22 FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIEL 540
            F  F  I  L+  G+ LP +          P +LVK  I   GD +L    P  +  DK  W  D+EF+R+ LAG+NP  I  +TE+P +S LDP  YG   S IT   +E+ + G ++V++AI    L+++D+HD F+PY+  +  L    +Y +RT+ FL   GTL P+AIEL
Sbjct:  296 FDSFKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWMTDDEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERGLEG-LTVQQAIDGNLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAIEL 469          
The following BLAST results are available for this feature:
BLAST of CX287114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_ORYSJ5.866e-2840.57Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_HORVU1.001e-2739.43Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 S... [more]
LOX1_SOLTU1.307e-2740.57Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOX3_SOYBN1.707e-2739.88Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOX2_SOYBN6.486e-2739.43Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX3_ORYSJ1.445e-2640.00Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX3_PEA2.465e-2639.43Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]
LOX1_LENCU5.490e-2636.42Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOX2_PEA2.086e-2540.00Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOX2_ORYSJ2.725e-2538.29Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionC01004H02SK Veg1 Citrus clementina cDNA clone C01004H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287114 ID=CX287114; Name=CX287114; organism=Citrus clementina; type=EST; length=541bp
CGAGGCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACT
CTTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGA
ACACACTGCTTCCCAGATTGGTTAAGGCAATTGAGGATACAGGAGATAAT
ATTTTGCTGTTTGAGACGCCAGAAACAATGGACAGAGACAAATTCTTTTG
GTTTAGGGATGAGGAATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGT
ATAGCATAAGGTTGATCACGGAATGGCCGTTGAAAAGCACACTCGATCCT
GAAATTTACGGACCACCAGAATCAGCAATTACCACAGAATTGATTGAAAA
AGAAATTGGAGGAATGATTTCTGTTGAAGAGGCTATAAAACAAAAGAAGT
TGTTCATCTTAGATTACCATGACCTATTTTTACCATATGTGGAAAAAGTG
AGACAACTCAAAAGCACAACGTTGTATGGATCTCGCACAATTTTCTTCCT
AACACCAGCCGGCACATTGAGACCAATAGCTATTGAGCTCA
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