CX287124

Overview
NameCX287124
Unique NameCX287124
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287124 vs. ExPASy Swiss-Prot
Match: URM1_VANPO (Ubiquitin-related modifier 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=URM1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11
Identity = 29/70 (41.43%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:  157 EKLIMKDLLSWVGTNLIKERP--EMFMKGDSVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 360
            E + + DL+ ++  N+I+++   E+F++  +VR G+L L+ND DWEL G+ +  LE+ D++ F STLHGG
Sbjct:   34 EPVTVGDLIDYIVENMIEDKNDVEVFLQNGTVRAGILTLINDTDWELEGEKEYELEDGDIISFTSTLHGG 103
The following BLAST results are available for this feature:
BLAST of CX287124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
URM1_VANPO9.725e-1141.43Ubiquitin-related modifier 1 OS=Vanderwaltozyma po... [more]

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Properties
Property NameValue
Genbank descriptionC01005A01SK Veg1 Citrus clementina cDNA clone C01005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287124 ID=CX287124; Name=CX287124; organism=Citrus clementina; type=EST; length=510bp
GTTCTCACATCTCTGTTCTTCTAGGGTTTTGCAAATTTCTGAAATTTCTG
CAAATCTTGAACCATGCAACTGACTCTAGAATTCGGTGGAGGGTTAGAGC
TTCTTTGTGATTCGGTAAAGGTCCATAATGTCGATGTTGTTCCACCAAAA
GGATCAGAGAAGTTGATTATGAAAGATTTGCTTTCTTGGGTCGGCACCAA
TTTGATCAAGGAGAGGCCTGAAATGTTCATGAAAGGAGATTCTGTGAGAC
CTGGTGTTCTAGTACTTGTGAATGATTGTGACTGGGAGCTCAGTGGGCAG
CTGGATACCACACTGGAGGAAAAGGATGTGGTTGTTTTTATTTCAACTTT
ACACGGCGGGTGATAAGCTAAATTATTGTAATTTCTTAGATGATAAGCAC
TTGTTATTGAAAATTGGTTGTACCCTTGTCTGGGTATTGAGTATGCTTGT
TGAAGCATGTGGAATGAGATGAAGATGTTGAATGTTTTGTTGAAAAAAAA
AAAAAAAAAA
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