CX287126

Overview
NameCX287126
Unique NameCX287126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.113e-54
Identity = 100/187 (53.48%), Postives = 130/187 (69.52%), Query Frame = 1
Query:   10 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P+S+DWR+KGAV  VK+Q  CGSCWAFST+A +EGINKI+TG LISLSEQEL+DC+   + GC+GG    + ++++DN G+ TE +YPY+   G C    K    V I  Y+ VP NDE +L +A+ANQPVSV  +  G  FQ Y+ GI+ G CGT+ DH VTAVGY    G  Y ++KNSWG +WG
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVVDN-GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGY----GKTYLLLKNSWGPNWG 182          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.213e-53
Identity = 103/194 (53.09%), Postives = 136/194 (70.10%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYKA+DG C    KN +  T   Y ++P   E+AL++AVAN+ PVSV I+    +F LY++G+ +   C  +++HGV  VGYG  +G DYW+VKNSWG  +G
Sbjct:  113 QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFG 305          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.703e-53
Identity = 106/191 (55.50%), Postives = 126/191 (65.97%), Query Frame = 1
Query:   10 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P SVDWR+KG V  VKDQG CGSCWAFST  A+EG +    G L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGGID+E+ YPY A D     Y+          + D+P   E+AL KAVA+  PVSVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E G  YWIVKNSWG  WG
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWG 192          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.027e-52
Identity = 100/191 (52.36%), Postives = 134/191 (70.16%), Query Frame = 1
Query:    4 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWG 570
            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TE++YPY A  G+C+     N+  +T   Y  V  NDE+++  AV+NQP++  I+     FQ Y  G+F+G CGTSL+H +T +GYG + +G  YWIV+NSWGSSWG
Sbjct:  122 AVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAYIT--GYSYVRRNDERSMMYAVSNQPIAALID-ASENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWG 307          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.341e-52
Identity = 97/190 (51.05%), Postives = 133/190 (70.00%), Query Frame = 1
Query:    4 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            A+P S+DWR  GAV EVK+QG CG CWAF+ IA VEGI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T+++YPY+A  G+C+  Y  N+  +T   Y  V  NDE  +  AV+NQP++  I+  G  FQ Y+ G+++G CG SL+H +T +GYG ++   YWIV+NSWGSSWG
Sbjct:    1 AVPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYIT--GYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS---YWIVRNSWGSSWG 183          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.288e-52
Identity = 100/193 (51.81%), Postives = 129/193 (66.84%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF++IIDN GID+E  YPYKA D  C  Y    +  T   Y ++P   E  L++AVAN+ PV V ++    +F LY SG+ +   C   ++HGV  +GYG  NG +YW+VKNSWGS++G
Sbjct:  113 QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFG 304          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52
Identity = 102/193 (52.85%), Postives = 130/193 (67.36%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYKA D  C    KN +  T   Y  +P  DE AL++AVA + PVSV I+    +F  Y+SG++    C  +++HGV  VGYGT +G DYW+VKNSWG ++G
Sbjct:  123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKN-RAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFG 314          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.136e-51
Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYKA+D  C  Y    +  T   Y ++P   E  L++AVAN+ PVSV ++    +F LY SG+ +   C  +++HGV  VGYG  NG +YW+VKNSWG ++G
Sbjct:  115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFG 305          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.483e-51
Identity = 106/189 (56.08%), Postives = 128/189 (67.72%), Query Frame = 1
Query:   19 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWG 570
            VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GIDTE  YPYKAID +C  Y       T+  Y +    DE ALQ AV N+ PVSV I+ G  +F  Y  G+ +   C +   +H VTAVGYGT+ NG DYWIVKNSWG+ WG
Sbjct:  110 VDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC-RYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWG 297          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 2.530e-51
Identity = 99/191 (51.83%), Postives = 134/191 (70.16%), Query Frame = 1
Query:   10 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYK-AIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++E+ YPY+  ++  C  +++ +    I  Y+++   DE  LQ A+   PVSVAI+    +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG
Sbjct:  122 PLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDEC-KFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWG 311          
The following BLAST results are available for this feature:
BLAST of CX287126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
MEX1_JACME7.113e-5453.48Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATS_BOVIN1.213e-5353.09Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CHICK2.703e-5355.50Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
BROM1_ANACO1.027e-5252.36Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
MDO1_PSEMR1.341e-5251.05Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATS_SAIBB2.288e-5251.81Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATS_MOUSE8.695e-5252.85Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_HUMAN1.136e-5152.08Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CRUST_PANBO1.483e-5156.08Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_DICDI2.530e-5151.83Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionC01005A03SK Veg1 Citrus clementina cDNA clone C01005A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287126 ID=CX287126; Name=CX287126; organism=Citrus clementina; type=EST; length=570bp
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCG
GGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGC
TGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATT
CATGGGGCAGTAGCTGGGGA
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