CX287126

Overview
NameCX287126
Unique NameCX287126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 4.325e-43
Identity = 89/204 (43.63%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGAD-------YWIVKNSWGSSWG 570
            LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E DYPY   DG      ++  V ++ ++  V +N+++     + N P++VAI    M  Q Y  G+     C   L+HGV  VGYG+   +        YWI+KNSWG SWG
Sbjct:  132 LPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYM--QTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWG 333          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.378e-43
Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            LP++ DWRK G V+ VK QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY   +G C   + N  V  I    ++ L  E  L+ AVA  +PVSVA E     F+ Y+SG++    CG +   ++H V AVGYG ENG  YW++KNSWG+ WG
Sbjct:  139 LPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSV-NITLGAEYELKYAVALVRPVSVAFE-VVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWG 330          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.258e-42
Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = 1
Query:    4 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAV-ANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL--DHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A+++ +   G++TE  YPY A++G C  Y K   V  +  Y  V    E  L+  V A +P +VA++     F +Y SGI+  +  + L  +H V AVGYGT+ G DYWIVKNSWG+ WG
Sbjct:  107 AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPYTAVEGQC-RYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVES-DFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWG 296          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 172.555 bits (436), Expect = 1.258e-42
Identity = 92/194 (47.42%), Postives = 122/194 (62.89%), Query Frame = 1
Query:   10 PDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P SVDWRKKG  V+ VK+QG+CGSCW FST  A+E    I TG ++SL+EQ+LVDC   + N GC GGL   AFE+I+ N GI  ED YPY+  DG C  ++    +  + D  ++ + DE+A+ +AVA   PVS A E     F +Y +GI++     +    ++H V AVGYG +NG  YWIVKNSWG  WG
Sbjct:  117 PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYC-KFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFE-VTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWG 308          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.258e-42
Identity = 92/190 (48.42%), Postives = 118/190 (62.11%), Query Frame = 1
Query:    4 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            A+P S+DWR  GAV  VK+Q  CG+CWAF+ IA VE I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII N G+ +   YPYKA  G+C T    N+  +T   Y  VP N+E ++  AV+ QP++VA++     FQ Y+SG+F G CGTSL+H VTA+GY    G D  I    WG+ WG
Sbjct:    1 AVPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYIT--GYARVPRNNESSMMYAVSKQPITVAVDANA-NFQYYKSGVFNGPCGTSLNHAVTAIGY----GQDSIIYPKKWGAKWG 181          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.644e-42
Identity = 93/194 (47.94%), Postives = 120/194 (61.86%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGR-CGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I  NGG+DTE+ YPY   DG C    KN   V + D  ++ L  E  L+ AV   +PVSVA E     F+ Y+ G+FT   CG +   ++H V AVGYG E+   YW++KNSWG  WG
Sbjct:  141 VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIG-VQVRDSVNITLGAEDELKHAVGLVRPVSVAFE-VVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWG 332          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.804e-42
Identity = 91/194 (46.91%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   10 PDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P S+DWRKKG  V+ VK+QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  ED YPY   +G C  +     V  + +  ++ LNDE A+ +AVA   PVS A E     F +Y+SG+++     +    ++H V AVGYG +NG  YWIVKNSWGS+WG
Sbjct:  115 PSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC-KFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFE-VTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWG 306          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.804e-42
Identity = 94/194 (48.45%), Postives = 123/194 (63.40%), Query Frame = 1
Query:   10 PDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWG 570
            P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  ED YPY   D SC  +     V  + +  ++ LNDE A+ +AVA   PVS A E     F +Y+SG+++ + C  + D   H V AVGYG +NG  YWIVKNSWGS WG
Sbjct:  115 PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC-RFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFE-VTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWG 306          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.662e-42
Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFT-GRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWG 570
            E LPD VDWR KGAV  V++QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YPY   +  C  ++++  VVT + + ++   DE AL+ AVA + PV V I G   +F+ Y+ G+++ G CG   DH V AVGYGT  +  DYWIVKNSWG+ WG
Sbjct:  180 ERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYPYVGTEQRC-RWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP-DHAVLAVGYGTHPSYGDYWIVKNSWGTDWG 370          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.391e-41
Identity = 90/199 (45.23%), Postives = 120/199 (60.30%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIEGGGMAFQLYESGI---FTGRCG-TSLDHGVTAVGYGTENGAD------YWIVKNSWGSSWG 570
            LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA    C  + +    V +  + D+P  +E A+Q+  +AN P+S+ I    M  Q Y  G+   +   C   +LDHGV  VGYG  +  +      YWIVKNSWG  WG
Sbjct:  394 LPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM--QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWG 588          
The following BLAST results are available for this feature:
BLAST of CX287126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
A494_ARATH4.325e-4343.63Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP3_SOLLC7.378e-4348.97Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATLL_FASHE1.258e-4246.63Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATH_HUMAN1.258e-4247.42Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
BROM2_ANACO1.258e-4248.42Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
ALEUL_ARATH1.644e-4247.94Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATH_RAT2.804e-4246.91Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_MOUSE2.804e-4248.45Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATL_BRUPA3.662e-4247.42Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CPR1_DROME1.391e-4145.23Putative cysteine proteinase CG12163 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionC01005A03SK Veg1 Citrus clementina cDNA clone C01005A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287126 ID=CX287126; Name=CX287126; organism=Citrus clementina; type=EST; length=570bp
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCG
GGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGC
TGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATT
CATGGGGCAGTAGCTGGGGA
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