CX287140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.224e-43 Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 2 Query: 116 RLDVAEFAGLRANAGATYATGARDASFF-------DAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 R A+F+G++ ++ A+ S F DA +++ VAA P K ++VAINGFGRIGRNF+RCW GR DS ++VV +ND+ GVK ASHLLKYDS+LGTF ADV +TISV+GK IK+VSNR+PLQLPW E+ IDIV+E TGVFVD PGAGKHI+ Sbjct: 24 RSTFAQFSGMKKVNQSSRLQPAQSGSAFGGYSDANDAFYTRVSGIVAATFGPTMK-----VRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTSGVKTASHLLKYDSILGTFDADVS-AGEDTISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIE 189
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.904e-43 Identity = 99/189 (52.38%), Postives = 126/189 (66.67%), Query Frame = 2 Query: 80 TTHSFPTQCSTKRLDVAEFAGLR----------ANAGATYATGARDAS--FFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 +T S CS R A+F+GL+ A G+ + G DA+ FF+AV P + + +K ++VAINGFGRIGRNF+RCW GR DS +DVV +ND+ GVK ASHLLKYDS+LGTF +DV + ++I+VDGK IKVVSNR+PL+LPW E+ IDIV+E TGVFVD GAGKHIQ Sbjct: 12 STSSKSAVCSG-RSSFAQFSGLKKVNNTARLQTAEQGSAFG-GVSDANDAFFNAVNTMGAPARTSNAPSMK------VRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTSGVKTASHLLKYDSILGTFDSDV-VAGEDSITVDGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQ 191
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.649e-38 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 2 Query: 290 NGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 NGFGRIGRNFLRC R++S L+V+ +NDSGGVK ASHLLKYDS LG F ADVKIVD+ ISV+GK I+VVS+RDP +LPW E+ ID+VIEGTGVF+D PGA KHI+ Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDADVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIE 107
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 67/111 (60.36%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 278 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 +VAINGFGRIGRNFLRCW GR DS L+VV +ND+ + +HLL+YDS+LG AD+ D +I+V+GK IK VS+R+PL LPWAE +D+VIE TGVFV GA KH+Q Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGINDTSDPRTNAHLLRYDSMLGKLDADIS-ADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQ 112
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.317e-29 Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 275 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 ++VAINGFGRIGRNF RCW GR+++ +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVFV GA KHI Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFVSKEGATKHI 112
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.547e-28 Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 2 Query: 275 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 ++VAINGFGRIGRNF RCW GR++S +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVF GA KH+ Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHV 112
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.448e-26 Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 275 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 +KV INGFGRIGR+F R GR++ +++V +ND K+ +HLLKYDS+ G FK V+ D ++I VDGK IKV + +DP Q+PW +LG+D+VIE TGVF D A KH+Q Sbjct: 3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKD-DSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQ 111
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.091e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 275 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 ++V INGFGRIGRN+ R + + +++V VND G +HLLKYD++LG KA+V + +TI+VDGK IKV+S R+P +PW ELG+DIVIE TG+F A KHI Sbjct: 3 IRVGINGFGRIGRNYFRALL-EQGADIEIVAVNDLGDTATTAHLLKYDTILGRLKAEVSHTE-DTITVDGKTIKVLSERNPADIPWGELGVDIVIESTGIFTKKADAEKHI 111
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 275 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 +++ INGFGRIGRN R R S L++V VND G V +HLL YDS+LG F +V + I V + IKV++ RDP LPW +LG+DIVIE TG+F D A H+ Sbjct: 3 VRIGINGFGRIGRNVFRAAAARS-SELEIVAVNDLGDVPTMAHLLAYDSILGRFPEEVT-AEPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHV 111
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 278 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 K+ INGFGRIGRN R +S ++VV +ND K +HLLKYD++ GT A+V +N +I V+GK IKV++ RDP QLPW++ G+++V+E TG F A KH+ Sbjct: 3 KIGINGFGRIGRNVFRA--ALNNSEVEVVAINDLTDAKTLAHLLKYDTVHGTLNAEVSANEN-SIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHL 109 The following BLAST results are available for this feature:
BLAST of CX287140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287140 ID=CX287140; Name=CX287140; organism=Citrus clementina; type=EST; length=612bpback to top |