CX287158

Overview
NameCX287158
Unique NameCX287158
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: NIM1_NEUCR (G2-specific protein kinase nim-1 OS=Neurospora crassa GN=nim-1 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:   57 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL----ASDEVKLLSKTKLNQKPFLNE 524
            ++HRDLK +N+F+ G    VK+GD GL+ +++    A + +GTP +M+PE+   E Y    D++S G  + E+   E P++      Q+ +K+  GK+     S+   E    I  CL VN  +R     LL  P +       EV   S+T   ++  LN+
Sbjct:  157 ILHRDLKPENVFL-GEDNSVKLGDFGLSKVMQSHDFASTYVGTPFYMSPEICAAEKYTLKSDIWSLGCIIYELCAREPPFN-AKTHYQLVQKIKEGKI-APLPSVYSGELFATIKDCLRVNPDRRPDTATLLNLPIVRLMRKEKEVVEFSRTLRTKEETLNK 315          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: MYLKB_DICDI (Probable myosin light chain kinase DDB_G0271550 OS=Dictyostelium discoideum GN=DDB_G0271550 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 52/186 (27.96%), Postives = 95/186 (51.08%), Query Frame = 3
Query:    9 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQ---VKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYE-EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKL---PGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASD----EVKLLSKTKLNQKPFLNETE 530
            RQI+  + Y+H     V HRDLK +N+  +G   +   V+I D GL+ I  G +   +  GTP+++APE+ E + Y+  VD++S G+ +  +  C +         ++++K+   +       +  I DL A+ FI + L +N  +R +A + +  P+LA +    E+K L     + K ++   E
Sbjct:  124 RQIVSAVEYMHQHG--VCHRDLKPENLLCSGDDEKEEIVRIADFGLSKIFEGGEELKTACGTPDYVAPEILECKPYDTSVDMWSIGV-ITYILLCGFAPFYADTHHELFQKILDLEYDFPEPEWNGITDL-AKDFISQLLIINPEERWTASQCIKHPWLAENHGDKELKSLDSAISSMKDYVRNRE 305          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 51/173 (29.48%), Postives = 92/173 (53.18%), Query Frame = 3
Query:   12 QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPEL-YEEDYN-ELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPFLN 521
            QI+  + Y HS+    +HRDLK +N+ ++ +  Q+KI D GL+ +        +  G+P + +PEL   ++YN   VDV+S G+ +  + T   P+ +  N  ++++K+ +G      Y     E +  I R L V+  KR + +E++  P+L+S +  +LS T  +    LN
Sbjct:  215 QIVSAINYCHSKR--AVHRDLKPENLLLDCNR-QIKIIDFGLSNVFTPGSYLKTFCGSPTYASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPF-DGDNYVELFQKILAGNYTIPSYLTH--ECKSLISRMLVVDPDKRATMEEIINHPWLSSTKQIILSTTMTDSLKNLN 381          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: M3K4_HUMAN (Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 3
Query:    3 WARQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSK-----SAHSVIGTPEFMAPELYE----EDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCLVNASK-RLSAKELLLDPFL 461
            +++QI   +  LH     ++HRD+K  NIF+    G +K+GD G +  L+ +        +S +GT  +MAPE+      E +    D++S G  V+EM T + P+ E  +  QI  KV  G  P     +   E + F+  CL +  K R +A +LL   F+
Sbjct: 1442 YSKQITIAINVLHEHG--IVHRDIKGANIFLTSS-GLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSP-EGKDFLSHCLESDPKMRWTASQLLDHSFV 1600          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: KIC1_YEAST (Serine/threonine-protein kinase KIC1 OS=Saccharomyces cerevisiae GN=KIC1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 3
Query:    9 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAA-ILRGSKSAHSVIGTPEFMAPELYEED--YNELVDVYSFGMCVLEMFTCEYPYS--ECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFL 461
            R++L  L  +H  +  VIHRD+K  N+ +    G VK+ D G+AA + + S    ++ GTP +MAPE+  E   Y+  VD++S G+   E+ T   PY   E     Q+  K    +L    YS      + FI  CL  +  +RLSA +LL   F+
Sbjct:  126 RELLVALKCIHKDN--VIHRDIKAANVLITNE-GNVKLCDFGVAAQVNQTSLRRQTMAGTPYWMAPEVIMEGVYYDTKVDIWSLGITTYEIATGNPPYCDVEALRAMQLIIKSKPPRLEDRSYS---TSLKEFIALCLDEDPKERLSADDLLKSKFI 276          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: IPL1_ASHGO (Spindle assembly checkpoint kinase OS=Ashbya gossypii GN=IPL1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 45/156 (28.85%), Postives = 79/156 (50.64%), Query Frame = 3
Query:   12 QILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKSAHSVIGTPEFMAPELYEE-DYNELVDVYSFGMCVLEMFTCEYPYSECANPAQIYKKVTSGKLPGAFYSIQDLEAQRFIGRCL-VNASKRLSAKELLLDPFLASDE 473
            Q+   L Y+H R+  ++HRD+K +NI + G    +K+ D G + I        ++ GT ++++PEL    +YNE VDV++ G+   E+     P+ E  +    YK++    L   F    D EA+  I R L  +   R+  KE+   P++  ++
Sbjct:  215 QMADALDYMHERN--ILHRDIKPENIII-GFNNTIKLTDFGWSVITPKGSKRKTLCGTVDYLSPELIRSREYNEKVDVWALGVLTYELLVGSPPFEE-ESKELTYKRILKRNL--IFPDHVDTEARHLISRLLEYDPGDRIPLKEVKKHPWIEKNK 364          
BLAST of CX287158 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 3
Query:    9 RQILQGLVYLHSRDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSKS---AHSVIGTPEFMAPELY--EEDYNELVDVYSFGMCVLEMFTCEYPYSECANPAQ--IYKKVTSGKLPGAFYSIQDL-------EAQRFIGRCLVNASKRLSAKELLLDPFLASDEVKLLSKTKLNQKPFLNETELGKLQLSDDP 560
            +Q+++GL Y H ++   +HRD+KC NI +N + GQ+K+ D GLA +    +S    + VI T  +  PEL   EE Y   +DV+S G  + E+FT +  +      AQ  +  ++     P  +  +  L         +++  R     S   SA   LLD  L  D  K  +  +  Q  FL + EL K+   D P
Sbjct:  841 KQLMEGLEYCHKKN--FLHRDIKCSNILLN-NSGQIKLADFGLARLYNSEESRPYTNKVI-TLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLP 1034          
The following BLAST results are available for this feature:
BLAST of CX287158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 347
Match NameE-valueIdentityDescription
NIM1_NEUCR9.927e-1130.86G2-specific protein kinase nim-1 OS=Neurospora cra... [more]
MYLKB_DICDI9.927e-1127.96Probable myosin light chain kinase DDB_G0271550 OS... [more]
MRKA_DICDI9.927e-1129.48Probable serine/threonine-protein kinase MARK-A OS... [more]
M3K4_HUMAN9.927e-1130.67Mitogen-activated protein kinase kinase kinase 4 O... [more]
KIC1_YEAST9.927e-1133.76Serine/threonine-protein kinase KIC1 OS=Saccharomy... [more]
IPL1_ASHGO9.927e-1128.85Spindle assembly checkpoint kinase OS=Ashbya gossy... [more]
CDK12_HUMAN9.927e-1129.80Cell division protein kinase 12 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionC01005C12SK Veg1 Citrus clementina cDNA clone C01005C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287158 ID=CX287158; Name=CX287158; organism=Citrus clementina; type=EST; length=581bp
GTTGGGCGCGGCAAATCTTGCAAGGCCTTGTATATCTGCATAGCCGTGAC
CCTCCAGTAATTCATAGAGACCTCAAGTGTGATAACATCTTTGTCAATGG
CCATCTTGGGCAAGTCAAGATTGGTGACCTAGGTCTTGCAGCGATTCTCC
GAGGCTCCAAATCAGCCCACAGTGTCATAGGCACCCCGGAGTTTATGGCG
CCAGAGCTGTATGAAGAGGATTATAATGAACTAGTTGATGTCTACTCATT
TGGGATGTGTGTTTTAGAGATGTTTACATGTGAATATCCATATAGTGAAT
GTGCAAATCCAGCACAAATTTACAAGAAAGTCACATCGGGGAAGCTACCA
GGAGCATTTTACAGTATTCAGGACTTGGAAGCACAAAGATTTATTGGAAG
ATGCTTAGTTAATGCTTCAAAGAGACTATCTGCAAAAGAACTTTTGCTTG
ATCCATTTTTGGCATCTGATGAAGTTAAATTGTTATCTAAGACCAAGCTA
AATCAAAAGCCTTTTTTGAATGAGACAGAATTGGGGAAACTGCAATTGAG
TGATGATCCACCAAGGACTGATATGACAATC
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