CX287205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.074e-37 Identity = 71/110 (64.55%), Postives = 93/110 (84.55%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEP Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEP 852
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_BRASB (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gcvP PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.074e-37 Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 LP HP P+G ++AAP+GSA IL ISY Y+ +MG +GLT A++IAILNANY+A RL+ H+P+L+R G VAHE I+D R LK T G+ +D+AKRL+DYGFH PTMS+PV GTLMIEP Sbjct: 728 LPGHPATDAA------TPSPVGPVSAAPYGSASILTISYIYMLLMGGEGLTRATEIAILNANYVAARLDPHFPVLYRNERGRVAHECIIDPRPLKQTCGVTVDDIAKRLIDYGFHAPTMSFPVAGTLMIEP 852
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.074e-37 Identity = 72/110 (65.45%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 G + AAP+GSA ILPI++ YI MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEP Sbjct: 741 GAVCAAPFGSASILPITWMYIRMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEP 850
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.709e-37 Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 LP H V +T +G ++A GSA ILPIS+ YIA+MG++GL A+++AILNANY+ ++L HYPILFRG G VAHE I+DLR LK ++GI EDVAKRLMD+GFH PTMS+PV GTLMIEP Sbjct: 732 LPGHSVTNT-----------VGAVSATALGSASILPISWAYIALMGAEGLKSATELAILNANYIMEKLSPHYPILFRGKQGRVAHECIIDLRPLKESSGISEEDVAKRLMDFGFHAPTMSFPVAGTLMIEP 851
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_PELUB (Glycine dehydrogenase [decarboxylating] OS=Pelagibacter ubique GN=gcvP PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.538e-37 Identity = 72/131 (54.96%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 LP H V+ G +G ++AAPWGS+ IL IS+ YI MMGS+GL +AS++AILNANY+A +L+ +PIL++G +G VAHE I+D+R +K+ GI ED+AKRL+D+G+H PTMSWPV GT+MIEP Sbjct: 722 LPKHSVIKDCG-----PVTGMGAVSAAPWGSSSILSISWMYIKMMGSEGLRKASQVAILNANYIAHKLKDSFPILYKGKSGNVAHECIIDIRTIKSETGITEEDIAKRLIDFGYHAPTMSWPVAGTMMIEP 847
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.621e-37 Identity = 72/116 (62.07%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 46 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 + SQ +G ++A+ +GSA ILPIS+ YIAMMG+ GLT A++ AIL+ANY+AKRL +YP+L+ G +G VAHE I+D+R L+ +GI ED+AKRLMD+GFH PTMS+PVPGTLMIEP Sbjct: 761 DASQNIGNVSASAFGSASILPISWMYIAMMGAAGLTAATETAILSANYVAKRLAPYYPVLYTGAHGLVAHECILDIRPLQKESGISNEDIAKRLMDFGFHAPTMSFPVPGTLMIEP 876
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_SYNS9 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain CC9902) GN=gcvP PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.035e-37 Identity = 72/131 (54.96%), Postives = 96/131 (73.28%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 LP HP + + + +G ++AA GSA ILPIS+ Y+ MMG+ L +AS +A+L+ANY+A RL+ H+P+LFRG G VAHE I+DLR LK AGI+ +D+AKRLMDYGFH PT+SWPV GT+M+EP Sbjct: 731 LPGHPFEN-------QTASAIGPVSAAALGSASILPISWMYLRMMGADALRQASAVALLSANYLAHRLDDHFPVLFRGATGRVAHECILDLRPLKRDAGIDVDDIAKRLMDYGFHAPTVSWPVAGTVMVEP 854
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_PECCP (Glycine dehydrogenase [decarboxylating] OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvP PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.035e-37 Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 +P H VV G+ + G ++AAP+GSA ILPIS+ YI MMG++GL +AS++AILNANY+A RL++ YP+L+ G +G VAHE I+D+R LK + GI D+AKRL+DYGFH PTMS+PV GTLM+EP Sbjct: 734 VPGHQVVKIDGVLTEQ-----GAVSAAPFGSASILPISWMYIRMMGAEGLKQASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDYGFHAPTMSFPVAGTLMVEP 859
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_ERWCT (Glycine dehydrogenase [decarboxylating] OS=Erwinia carotovora subsp. atroseptica GN=gcvP PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.035e-37 Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 +P H VV G+ + G ++AAP+GSA ILPIS+ YI MMG++GL +AS++AILNANY+A RL++ YP+L+ G +G VAHE I+D+R LK + GI D+AKRL+DYGFH PTMS+PV GTLM+EP Sbjct: 734 VPGHQVVKIDGVLTEQ-----GAVSAAPFGSASILPISWMYIRMMGAEGLKQASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDYGFHAPTMSFPVAGTLMVEP 859
BLAST of CX287205 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.882e-37 Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 393 LPSHPVVS GG + +++++P+GSA ILPIS+ Y+ MMG GL +ASK A+LNANYMAKRL HY +++ N AHEFI+D R K TAG++ D+AKRL DY FH PT+SWP+ TLMIEP Sbjct: 795 LPSHPVVSCGG------KNGITSVSSSPFGSAGILPISWAYMRMMGLAGLRDASKAALLNANYMAKRLSSHYKLVYTNKNNLCAHEFILDAREFKATAGVDATDIAKRLQDYSFHAPTLSWPIANTLMIEP 919 The following BLAST results are available for this feature:
BLAST of CX287205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 351
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287205 ID=CX287205; Name=CX287205; organism=Citrus clementina; type=EST; length=394bpback to top |