CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.723e-42 Identity = 74/117 (63.25%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 72 MGHHSCCNQQK-VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC+Q K VK+G W PEED+KL YI +GYG W +P+ AGL RCGKSCRLRW+NYLRPDIRRG+F+ EE I+ LH+++GN+W+ IA HLPGRTDNEIKNYWN+ ++KK+ Sbjct: 1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKL 117
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.351e-41 Identity = 70/116 (60.34%), Postives = 90/116 (77.59%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EED++L YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG F+ EE++LII LHS++GN+W+ IA LPGRTDNEIKNYWN+ I++K+ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.765e-41 Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +KRG W+ EED+ L YI ++G G W +P+ AGL+RCGKSCRLRWINYLR D++RG TPEEE+L++ LHS +GNRW+ IA HLPGRTDNEIKNYWNS + +K+ Sbjct: 1 MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.305e-41 Identity = 74/118 (62.71%), Postives = 93/118 (78.81%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 MG CC++ VK+G W+ EED+KLI +I T+G CW VP+ AGL+RCGKSCRLRW NYLRPD++RG + EEKL+I LHS +GNRW+ IA+ LPGRTDNEIKN+WN+ IKKK+ K Sbjct: 1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLK 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.759e-41 Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIR 422 MG CC + ++RG W+ EED+KL+ +IT +G CW +P+ AGL RCGKSCRLRW NYLRPD++RG F+ EE LI+ LH+ +GNRW+ IA+ LPGRTDNEIKNYWN+ +KK++R Sbjct: 1 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLR 117
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.494e-40 Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 MG +CC ++ VKRG W+ +ED+ L Y+ HG G W EVP+KAGL+RCGKSCRLRW+NYLRP+IRRG + +EE LII LH ++GNRW+ IA LPGRTDNEIKNYWNS + ++ Sbjct: 1 MGRRACCAKEGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRR 115
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.328e-40 Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +KRG W+ EED+ L YI HG G W +P+ AGL RCGKSCRLRWINYLR D++RG + EEE +II LH+ +GNRW+ IASHLPGRTDNEIKNYWNS + ++I Sbjct: 1 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 9.684e-40 Identity = 69/116 (59.48%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +K+G W+PEED+ L+ +I HG+G W +P++AGL RCGKSCRLRWINYLRPDI+RG F+ EEE II LH ++GNRW+ IA+ LPGRTDNEIKN W++ +KK++ Sbjct: 1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.806e-39 Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 75 GHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 G CC + + RG W+P+ED +LI YI HG+ W +P++AGL RCGKSCRLRWINYLRPD++RG FT EEE+ II LH ++GN+W+ IA+ LPGRTDNEIKN WN+ +KKK+ Sbjct: 4 GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKV 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.277e-39 Identity = 71/117 (60.68%), Postives = 92/117 (78.63%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGC-WSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC++ KVKRG WSPEED KL YI +G G W P KAGL+RCGKSCRLRW+NYLRP+I+ G F+ EE+++I SL + +G+RW+ IA+HLPGRTDN+IKNYWN+ ++KK+ Sbjct: 1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKL 117 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |