CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 3 Query: 90 CNQQ--KVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWN-SWIKKKIRK 425 CN +V++G W+ EED LI +I+ HG G W+ + AGL+R GKSCRLRW+NYLRPD+RRG TPEE+ LI+ LH+ GNRW+ IA HLPGRTDNEIKNYWN + I+K I++ Sbjct: 6 CNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQ 120
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 + +V++G W+ EED LI YI HG G W+ + + AGL+R GKSCRLRW+NYLRPD+RRG TPEE+ +I+ LH+ GNRW+ IA HLPGRTDNEIKN+W + I+K I++ Sbjct: 17 EAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQ 126
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.210e-35 Identity = 67/114 (58.77%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 90 CNQQ--KVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 CN Q +V++G W+ EED LI YI HG G W+ + AGL+R GKSCRLRW+NYLRPD+RRG TPEE+ LI+ LH+ GNRW+ IA LPGRTDNEIKNYW + I+K + + Sbjct: 6 CNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQ 119
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 60/107 (56.07%), Postives = 82/107 (76.64%), Query Frame = 3 Query: 99 QKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 Q+ K+GLW+ EED L+ Y+ HG G W+ + K GL+RCGKSCRLRW+NYL P++ +G FT +EE LII LH ++GNRW+ IA +PGRTDN++KNYWN+ + KK+ Sbjct: 12 QEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 5.499e-35 Identity = 60/107 (56.07%), Postives = 82/107 (76.64%), Query Frame = 3 Query: 99 QKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 Q+ K+GLW+ EED L+ Y+ HG G W+ + K GL+RCGKSCRLRW+NYL P++ +G FT +EE LII LH ++GNRW+ IA +PGRTDN++KNYWN+ + KK+ Sbjct: 12 QEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.600e-34 Identity = 62/103 (60.19%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKK 413 +K+G W+ ED L+ Y+ HG G W+ V + GL RCGKSCRLRW N+LRP++++G FT EEE+LII LHS +GN+WA +A+HLPGRTDNEIKNYWN+ IK+ Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.600e-34 Identity = 62/103 (60.19%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKK 413 +K+G W+ ED L+ Y+ HG G W+ V + GL RCGKSCRLRW N+LRP++++G FT EEE+LII LHS +GN+WA +A+HLPGRTDNEIKNYWN+ IK+ Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.831e-30 Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +++G W+ EED L + I +G G W +VP +AGL RC KSCRLRW+NYL+P I+RG+F+ +E L++ LH ++GNRW+ IA LPGRT N++KNYWN+ + KK Sbjct: 8 LRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.326e-30 Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +++G W+ EED L + I +G G W +VP +AGL RC KSCRLRW+NYL+P I+RG+ + +E L++ LH ++GNRW+ IA LPGRT N++KNYWN+ + KK Sbjct: 8 LRKGAWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.085e-30 Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +++G W+ EED L I +G G W +VP +AGL RC KSCRLRW+NYL+P I+RGR + +E L++ LH ++GNRW+ IA LPGRT N++KNYWN+ + KK Sbjct: 8 LRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |