CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 9.085e-30 Identity = 54/110 (49.09%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 Q++ ++G W+ +ED L+ ++ G W V + +GL R GKSCRLRW+NYL P ++RG+ TP+EE+L++ LH+ GNRW+ IA LPGRTDNEIKNYW + ++KK ++ Sbjct: 5 QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 114
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.452e-29 Identity = 53/110 (48.18%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 ++++++G W+ +ED +L+ + G W + + +GL R GKSCRLRW+NYL P ++RGR +P EE+LI+ LH+ GNRW+ IA LPGRTDNEIKNYW + ++KK ++ Sbjct: 5 REEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE 114
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.691e-29 Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 108 KRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 ++G W+ +ED L+ ++ G W + + +GL R GKSCRLRW+NYL P ++RG+ TP+EE+L++ LH+ GNRW+ IA LPGRTDNEIKNYW + ++KK ++ Sbjct: 8 RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.004e-28 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +++G W+ EED L + I +G G W VP + GL RC KSCRLRW+NYL+P I+RG+ +E L++ LH ++GNRW+ IA LPGRT N++KNYWN+ + KK Sbjct: 8 LRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.238e-28 Identity = 54/110 (49.09%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 ++++++G W+ +ED +L+ + G W V + +GL R GKSCRLRW+NYL P ++ GR +P+EE LII LH+ GNRW+ IA LPGRTDNEIKNYW + ++KK ++ Sbjct: 5 REEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE 114
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 120 WSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNS 401 W PEED L Y+ +G W+ VP++ GL SCR RW+N+L+P +++G FT EEEK ++ LH+V+GN+W+ +A PGRTDNEIKN+WN+ Sbjct: 21 WKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNA 114
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 4.367e-24 Identity = 48/103 (46.60%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 +G W+ EEDEK+I + +G W+ + ++ R GK CR RW N+L P++++ +T EE+++I H V+GNRWA IA LPGRTDN +KN+WNS IK+K+ Sbjct: 83 KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLR-GRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKV 184
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.271e-23 Identity = 47/103 (45.63%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 +G W+ EED+K+I + +G W+ + + R GK CR RW N+L P++++ +T EE+++I H V+GNRWA IA LPGRTDN +KN+WNS IK+K+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAKHLK-GRLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKV 184
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.660e-23 Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 81 HSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 H + + VK G W+ EED+++I + +G WS + + R GK CR RW N+L PD+++ +T EE+++I S H +GNRWA IA LPGRTDN IKN+WNS +K+K+ + Sbjct: 77 HKVLSPELVK-GPWTKEEDQRVIELVHKYGPKKWSIIAKHLK-GRIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRKVEQ 189
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.167e-23 Identity = 47/103 (45.63%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 +G W+ EED+K+I + +G W+ + + R GK CR RW N+L P++++ +T EE+++I H V+GNRWA IA LPGRTDN +KN+WNS IK+K+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAKHLK-GRLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKV 184 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |