CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.553e-21 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 84 SCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 S N+ K K G W+ EEDEKL + HG W + L R G+ CR RW N L P I+R +T EE+++I+ HS GN+WA I+ LPGRT+ IKN+WNS +K+K+ K Sbjct: 749 SSSNESKAK-GHWTKEEDEKLRSLVDLHGTKRWKYIASLLCL-RNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSK 860
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.029e-21 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKK 413 +G W+ +ED+K+I + T+G WS++ R GK CR RW N+L P+I++ ++ EE+++I H++ GN+WA IA LPGRTDN IKN+WNS +K+ Sbjct: 201 KGAWTKDEDDKVIELVKTYGPKKWSDIALHLK-GRMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.029e-21 Identity = 44/105 (41.90%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 +G W+ EED+++I + +G WS + + R GK CR RW N+L P++++ +T E+++I H +GNRWA IA LPGRTDN IKN+WNS +++K+ + Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.649e-21 Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +G W+ EED+++I + +G WS + + R GK CR RW N+L P++++ +T EE++ I H +GNRWA IA LPGRTDN IKN+WNS +++K Sbjct: 89 KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 189
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.649e-21 Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 105 VKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 + +G W EED KL+ + G WS + K R GK CR RW N+L P++R+ +TPEE+K+II H+ +GN+W I+ L GR N IKN+WNS + KKI Sbjct: 275 IVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIP-GRIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKI 378
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.460e-21 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 +G WS EED +I + +G WS + + R GK CR RW N+L P I + +T EEE +I H + GN+WA + LPGR+DN IKN+WNS +KKK+ Sbjct: 87 KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLP-GRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKL 188
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19 Identity = 42/102 (41.18%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 111 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 +G W+ +ED+ +I+ + G W+ + R GK CR RW N+L P+I++ +T +E+++I H +GN+WA IA LPGRTDN IKN+WNS +++K Sbjct: 136 KGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 108 KRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAG--LQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 +R W PEED L+ Y+ +G WS V ++ L R KSC RW NYLRP I++G T +E++L+I L + GN+W IA+ +PGRT + +W + +K+ R+ Sbjct: 8 ERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 115
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.171e-17 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 108 KRGLWSPEEDEKLIRYITTHGYGCWSEVPEK--AGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 +R W PEED L Y+ +G W V ++ L R KSC RW NYLRP I++G T EE++L+I L + GN+W IA+ +PGRT + +W + +K+ R+ Sbjct: 3 ERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE 110
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB1_NEUCR (Myb-like DNA-binding protein myb-1 OS=Neurospora crassa GN=rca-1 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.566e-16 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 3 Query: 93 NQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKK 416 N +RG WS ED++LI+ + G G W V G R K CR RW L+P + G T EE +I+ + G RWA IA L GR+DN +KNYWN +K Sbjct: 3 NMPDQRRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGT-RTPKQCRERWHQNLKPGLNHGPMTQEEAAIIVREVDLKGPRWADIARKLQGRSDNAVKNYWNGLNNRK 109 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |