CX287241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 76/133 (57.14%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 3 GFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPYEE 401 G +L G++TP H L SGVG F+G++ EII+TF L++TVYAT DPKKGS+ + P+ GF+VGANIL GPFSG SMNPARSFGPA+ SGD+T+ W+YWVGPL+GGGLAG +Y ++ H P+ E Sbjct: 116 GAVLVQFCTGVATPTHGL-SGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVASSE 247
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 77/132 (58.33%), Postives = 101/132 (76.52%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPYEEA 404 LL ++T G S P H +A+G+G +G++ EI++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+VSGD++ W+YWVGPL+GG LAG IY FI S+ P P E+ Sbjct: 118 LLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI-GSYAPAPTTES 248
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 3 Query: 9 LLSYLTGGL-STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-VRSHVPIPYEEARF 410 LL+ LTGG + PVH A GVG + + E +LTFSLLF VYAT+VD ++ ++ LGPLL G VVGANILAGGP+SGASMNPARSFGPAL +G+W DHW+YWVGPLIGG LAG +YE F+ H P+P + F Sbjct: 117 LLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRNDGDF 251
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.358e-41 Identity = 82/134 (61.19%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 6 FLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVR--SHVPIPYEE 401 FLL +LTGGL+TPVH LA GVG QG++ E + TFSLLF +YATI+DP+K + G GPLLTG +VGAN +AG SGASMNPARSFGPA+ SG WT HWVYWVGPL GG LA +YE F+ +H +P ++ Sbjct: 116 FLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLPQQD 248
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 6 FLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-VRSHVPIP 392 FLLS+ TGG P L++GVG +++EI++TF L++TVYAT VDPK GS+ + P+ GF+VGANILAGG FSGASMNPA +FGPA+VS WT+HWVYW GPLIGGGLAG IY+ FI +H +P Sbjct: 120 FLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLP 249
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40 Identity = 78/129 (60.47%), Postives = 95/129 (73.64%), Query Frame = 3 Query: 6 FLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIP 392 FLL + TGGL+T L +GV ++ ++ EI++TF L++TVYAT VDPKKGS+ + P+ GF+VGANIL GG F GASMNPA SFGPALVS W WVYWVGPLIGGGLAG IYE FI +H +P Sbjct: 119 FLLRFSTGGLATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFISHTHEQLP 246
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.199e-39 Identity = 72/120 (60.00%), Postives = 94/120 (78.33%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI 368 LL ++T G S P H +++G+G +G++ EI++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+VSGD + W+YWVGPL+GG LAG IY FI Sbjct: 118 LLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFI 237
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 3 Query: 6 FLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPYEE 401 FLL Y+T G + P H + SG+ +G++ EI++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+ +G++ +WVYWVGPL+GGGLAG +Y FI S+ P+ +E Sbjct: 117 FLLQYVTHGQAIPTHGV-SGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVYGDVFIA-SYQPVGQQE 246
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.772e-39 Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 3 Query: 6 FLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIP 392 FLL + TGG +T L +GV ++ ++ EI++TF L++TVYAT VDPKKGS+ + P+ GF+VGANIL GG F GASMNPA SFGPALVS +W WVYWVGPLIGGGLAG IYE FI +H +P Sbjct: 119 FLLRFSTGGQATGTFGL-TGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLP 246
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.015e-38 Identity = 70/124 (56.45%), Postives = 96/124 (77.42%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSH 380 LL ++T G + P H +A G+ +G+++E+++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+ +GD+ +WVYWVGPL+GGGLAG +Y FI S+ Sbjct: 118 LLGFVTHGKAIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDVFIGGSY 240 The following BLAST results are available for this feature:
BLAST of CX287241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287241 ID=CX287241; Name=CX287241; organism=Citrus clementina; type=EST; length=631bpback to top |