CX287241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 21 LTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIY 353 ++GG++ P VG Q E I++F+L+F V A D + ++ L + G V NIL GP + ASMNP R+ GPA+ + ++ WVY P++G + Y Sbjct: 183 MSGGVTVPT------VGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTY 285
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 3 Query: 21 LTGGLSTPVHTLASGVGY--FQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDW--TDHWVYWVGPLIGGGLAGFIYEQF 362 L+GG ++ + L S GY ++ E+++TF L + + + + G P+ G + L P + S+NPARS GPAL GDW + W++W+ P++G LAG Y F Sbjct: 113 LSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGST---DRRAPKGFAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVGDWAIAELWLFWLAPIVGAALAGLFYHAF 227
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 3 Query: 72 YFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIG--GGLAGFIYEQFFIVRSH 380 ++ ++ EII+TF+++F A D + ++ L L G V + G SG SMNPAR+ GPAL S +T W+Y++GP++G G + Y +F SH Sbjct: 161 HWHSLVIEIIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLGTLSGAWTYTYIRFEEAPSH 263
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 39 TPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDG----LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGD---WTDHWVYWVGPLIGGGLAGFIYEQ 359 +P +T G+G E++ TF L++TV++ D K+ + D L PL GF V LA P +G +NPARS G A++ + W HW++WVGP G LA +Y Q Sbjct: 177 SPGYTKGDGLGA------EVVGTFVLVYTVFSA-TDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAA-VYHQ 282
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 3 Query: 15 SYLTGGLSTPVH---TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIG 329 S+ G+ PV+ VG + E + TF LLF + A DP ++ L + G + N L GP +GASMNPAR+ GPA+ +G +T WVY V +G Sbjct: 187 SFAVKGMYHPVNPGIVTVPKVGTVEAFFLEFVTTFVLLFIITALATDPN--AVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLG 292
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 36 STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIY 353 +TP ++A Q E +++F L+F V D + +I L L G V N+L GP +GASMNPARS GPA+V+G + WVY P+ G + Y Sbjct: 179 TTPAGSMA------QAAALEFVISFFLMFVVSGVATDNR--AIGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWAY 276
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 72 YFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIY 353 ++ ++ EI++TF+++F A D + ++ L L G V + GP SG SMNPAR+ PA+ S +T W+Y++GP++G ++Y Sbjct: 166 HWHALVIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVY 257 The following BLAST results are available for this feature:
BLAST of CX287241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287241 ID=CX287241; Name=CX287241; organism=Citrus clementina; type=EST; length=631bpback to top |