CX287241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.261e-38 Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSH 380 LL ++T G + P H ++ G +G+++EI++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+ + D+ +WVYWVGPLIGGGLAG +Y FI S+ Sbjct: 118 LLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGGSY 241
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 3.857e-38 Identity = 77/135 (57.04%), Postives = 94/135 (69.63%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-----VRSHVPIPYE 398 LL LTGG +TPVH LA GVG QG+ E + TF+LL + ATI+DP++ + G GPLLTG +VGAN +AGG +GASMNPARSFGPAL +G+W HWVYWVGPL GG LA YE F+ +H P+P E Sbjct: 122 LLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLPQE 256
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.579e-38 Identity = 73/128 (57.03%), Postives = 94/128 (73.44%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIP 392 LL ++T S P L+ GVG ++ EI++TF L++TVYAT VDPKKG+I + P+ GF+VGANIL GG F+GASMNPA SFGPA+VS W++HWVYW GPLIGGG+AG +YE FI +H +P Sbjct: 120 LLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLP 246
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.579e-38 Identity = 73/128 (57.03%), Postives = 94/128 (73.44%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIP 392 LL ++T S P L+ GVG ++ EI++TF L++TVYAT VDPKKG+I + P+ GF+VGANIL GG F+GASMNPA SFGPA+VS W++HWVYW GPLIGGG+AG +YE FI +H +P Sbjct: 119 LLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLP 245
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.593e-38 Identity = 70/120 (58.33%), Postives = 93/120 (77.50%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI 368 LL ++T G + P H +A G+ +G++ EI++TF+L++TVYAT DPKKGS+ + P+ GF+VGANILA GPFSG SMNPARSFGPA+ +G++ +WVYWVGPLIGGGLAG +Y FI Sbjct: 118 LLKFVTHGKAIPTHGVA-GISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFI 236
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.501e-37 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPY 395 LL TGG+ P LASGVG + ++ E ++TF L++ YAT++DPK+G + + PL GF++GAN+LAGGPF GA MNPAR FGPALV W HWVYW+GP +G GLAG +YE I + +P+ Sbjct: 124 LLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAVPH 252
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.116e-36 Identity = 69/129 (53.49%), Postives = 93/129 (72.09%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-VRSHVPIP 392 LL TGG + +L++GVG + +++EI++TF L++TVYAT VDPKKG + + P+ GF+VGANILAGG F GASMNPA SFGPA+V+G W +HWVYW+GP +G +A IY+ FI R H +P Sbjct: 120 LLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLP 248
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.764e-36 Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI 368 LL T G+ LASGVG G++ EIILTF L++ VY+T++DPK+GS+ + PL G +VGANIL GGPFSGASMNPAR+FGPALV W DHW+YWVGP IG LA IYE I Sbjct: 128 LLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVI 247
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.764e-36 Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-VRSHVPIP 392 LL TGG+ T +L+ GV + +++EI++TF L++TVYAT VDPKKG I + PL G +VGANIL GG F GASMNPA SFGPA+VS WT+HWVYWVGP IG +A +Y+ FI H P+P Sbjct: 120 LLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLP 248
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.158e-36 Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFI-VRSHVPIPYEEARF 410 LL TGG + +L++GVG ++ E+++TF L++TVYAT VDPKKG + + P+ GF+VGANILAGG F GASMNPA SFGPA+V+G W +HWVYWVGPL G +A +Y+ FI R H +P A + Sbjct: 120 LLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRPHQQLPTTAADY 254 The following BLAST results are available for this feature:
BLAST of CX287241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287241 ID=CX287241; Name=CX287241; organism=Citrus clementina; type=EST; length=631bpback to top |