CX287241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 21 LTGGLS-TPVH-TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFF 365 + GGL T VH L +G G++ E+I+TF L+FT++A+ D K+ + G L GF V L ++GASMNPARSFGPA++ G+W +HW+YWVGP+IG LAG +YE F Sbjct: 144 VVGGLGVTTVHGNLTAG----HGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 255
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 21 LTGGLS-TPVH-TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPYEEA 404 + GGL T VH L +G G++ E+I+TF L+FT++A+ D K+ + G L GF V L ++GASMNPARSFGPA++ G+W +HW+YWVGP+IG LAG +YE F + ++EA Sbjct: 141 VVGGLGVTTVHGNLTAG----HGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRRFKEA 265
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21 Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 21 LTGGLS-TPVH-TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFF 365 + GGL T VH L +G G++ E+I+TF L+FT++A+ D K+ + G L GF V L ++GASMNPARSFGPA++ G+W +HW+YWVGP++G LAG +YE F Sbjct: 141 VVGGLGVTTVHGNLTAG----HGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVF 252
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 21 LTGGLS-TPVH-TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFF 365 + GGL T VH L +G G++ E+I+TF L+FT++A+ D K+ + G L GF V L ++GASMNPARSFGPA++ G+W +HW+YWVGP+IG LAG +YE F Sbjct: 141 VVGGLGVTMVHGNLTAG----HGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 21 LTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIPYEEA 404 + GGL V T+ + G++ E+I+TF L+FT++A+ D K+ + G L G V L ++GASMNPARSFGPA++ G+W +HW+YWVGP+IG LAG +YE F + ++EA Sbjct: 141 VVGGLG--VTTVHGNLSAGHGLLVELIITFQLVFTIFASC-DSKRTDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRRFKEA 265
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 12 LSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVR 374 +S GL V + +S + Q ++ E ++TF +L V + DP + I G PL G + A L +GASMNPARSFGPA+V W DHWVYWVGP++G +A +Y+ F VR Sbjct: 121 VSEAVSGLDLGVSSFSSTLTVGQAVLIEALITF-ILVVVVKGVSDPGRTDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNMWIDHWVYWVGPIVGAIVAALLYKFVFKVR 240
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 52/136 (38.24%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 9 LLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDG--------LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRSHVPIP 392 +L Y++ G + P +A + F I E +LTF +++TV+ DP+ G G LG L+ G V GA +LA G +GASMNPARSFGPA+VSG +++ VYW GP++G +A +++ P P Sbjct: 117 VLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHVA-GDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQALVFPTVPEPAP 251
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 45 VHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYE 356 ++TL V Q EI LT + ++AT + + G + + L GF + L G ++GA MNPARSF PA+++G++T+HWVYWVGP+IGGGL +Y+ Sbjct: 118 LNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLYD 220
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18 Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 9 LLSYLTGGL---STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEQFFIVRS 377 +LS +T L S +++LA GV QG+ EII T L+ V AT D ++ + G PL GF V L ++G +NPARSFG A+++ ++ DHWV+WVGP IGG LA IY+ RS Sbjct: 113 ILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRS 237
BLAST of CX287241 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 45 VHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYE 356 ++TL GV Q EI LT + ++AT + + G + + L GF + L G ++GA MNPARSF PA+++ ++T+HWVYWVGP+IGGGLA +Y+ Sbjct: 118 LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYD 220 The following BLAST results are available for this feature:
BLAST of CX287241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287241 ID=CX287241; Name=CX287241; organism=Citrus clementina; type=EST; length=631bpback to top |