CX287251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TD+ QVLKEV E +KEYP++ +RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TD+ QVLKEV E + EYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TD+ QVLKEV E + EYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVLKE+ E +K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 124 TDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPPG Sbjct: 133 TDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVLKE+ E +K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 124 TDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVLKE+ E +K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 124 TDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL E+ E +K YP++++RIIGFDN RQVQCISF+A KPPG Sbjct: 135 TDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179 The following BLAST results are available for this feature:
BLAST of CX287251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287251 ID=CX287251; Name=CX287251; organism=Citrus clementina; type=EST; length=371bpback to top |