CX287251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 135 TDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 135 TDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 135 TDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 136 TDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 133 TDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 136 TDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 136 TDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 136 TDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 135 TDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP G Sbjct: 128 TDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA QVLKEV E + EYP +F+RIIGFDN RQVQCISF+A+ P Sbjct: 133 TDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175 The following BLAST results are available for this feature:
BLAST of CX287251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287251 ID=CX287251; Name=CX287251; organism=Citrus clementina; type=EST; length=371bpback to top |