CX287251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TDA QVLKE+ E+ K +P + RIIGFDN RQVQCISFLA KPPG Sbjct: 137 TDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 134 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 134 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 134 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS3_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 134 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 134 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 130 TDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11 Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 139 TD+ QVL+E+ +KEYP++F+RIIGFDN RQVQCISF+A KP G Sbjct: 137 TDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11 Identity = 28/43 (65.12%), Postives = 38/43 (88.37%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TD++QV++E+ E +KEYP +F+R+IGFDN RQVQCISF+A KP Sbjct: 137 TDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
BLAST of CX287251 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11 Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 5 TDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 133 TDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP Sbjct: 135 TDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177 The following BLAST results are available for this feature:
BLAST of CX287251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287251 ID=CX287251; Name=CX287251; organism=Citrus clementina; type=EST; length=371bpback to top |