CX287254

Overview
NameCX287254
Unique NameCX287254
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length493
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF1_XENLA (E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laevis GN=smurf1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.512e-37
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R    I  Q  A  +GF ELIP  L+  F  KELEL+I GL  ID+ D +ANT      A S ++QWFW+ V+ F +E +ARLLQFVTG+++VPL+GF ALQG +G+   + F IH    + D+LP AHTCFN++D+P Y S + L E+LL A+ E
Sbjct:  569 RFMRGIEAQFLALQKGFNELIPQHLLKPFEQKELELIIGGLDKIDISDWKANTRLKHCLANSNIVQWFWQAVESFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE 724          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = 1
Query:    1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492
            ++ + R T  +  Q  AFL+GF E+ P E +  F++KELEL++ G+ +ID+ D + +T Y  Y+  S  IQWFW+VV+    E + RLLQFVTGT ++P+ GF+ L G +G QKF I K  G    LP +HTCFN+LDLP Y S + L E+LL AI E  EGFG
Sbjct:  707 LLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKSTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKV-GKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEE-TEGFG 868          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF2_MOUSE (E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus GN=Smurf2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 74/153 (48.37%), Postives = 102/153 (66.67%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R    I  Q  A  +GF E+IP  L+  F++KELEL+I GL  ID+ D + NT     +  S V++WFW+ V+ F +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+     ++LP AHTCFN++D+P Y S + L E+LL AI E
Sbjct:  589 RFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVSDWKVNTRLKHCTPDSNVVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEE 741          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF2_HUMAN (E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens GN=SMURF2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R    I  Q  A  +GF E+IP  L+  F++KELEL+I GL  ID++D + NT     +  S +++WFW+ V+ F +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+     ++LP AHTCFN++D+P Y S + L E+LL AI E
Sbjct:  589 RFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVNTRLKHCTPDSNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEE 741          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF2_DANRE (E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 71/153 (46.41%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R    I  Q  A  +GF E+IP  L+  F++KELEL++ GL  ID++D ++NT     +  S +++WFW  V+ + +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+   S ++LP AHTCFN++D+P Y S   L ++LL AI E
Sbjct:  606 RFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTRLKHCTPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEE 758          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECW2_MOUSE (E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 75/154 (48.70%), Postives = 105/154 (68.18%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEY-SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R+   +  Q  + + GF E++   L+S+F+ +ELEL+I+G  +IDL+D R NTEY  GY     VI+WFW  V+ F+ E + RLLQFVTGTS +P EGF++L+G +G ++F + K +G I  LP AHTCFN+LDLP YPS   L E+LL A+ E
Sbjct: 1419 RIERGVVQQTESLVRGFYEVVDARLVSVFDARELELVIAGTAEIDLNDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEK-WGKITALPRAHTCFNRLDLPPYPSFSMLYEKLLTAVEE 1571          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECW2_HUMAN (E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.119e-36
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 1
Query:   16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEY-SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474
            R+   +  Q  + + GF E++   L+S+F+ +ELEL+I+G  +IDL D R NTEY  GY     VI+WFW  V+ F+ E + RLLQFVTGTS +P EGF++L+G +G ++F + K +G I  LP AHTCFN+LDLP YPS   L E+LL A+ E
Sbjct: 1413 RIERGVVQQTESLVRGFYEVVDARLVSVFDARELELVIAGTAEIDLSDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEK-WGKITALPRAHTCFNRLDLPPYPSFSMLYEKLLTAVEE 1565          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36
Identity = 76/164 (46.34%), Postives = 108/164 (65.85%), Query Frame = 1
Query:    1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492
            ++ E R +  ++ Q  AFL+GF E++P + +  F++KELE+++ G+ ++DL D + NT Y  Y+  S  I WFW+ V+    E + RLLQFVTGT ++PL GF+ L G +G QKF I K  G    LP +HTCFN+LDLP Y S + L+E+LL AI E  EGFG
Sbjct:  755 LMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKV-GKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 916          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36
Identity = 76/164 (46.34%), Postives = 108/164 (65.85%), Query Frame = 1
Query:    1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492
            ++ E R +  ++ Q  AFL+GF E++P + +  F++KELE+++ G+ ++DL D + NT Y  Y+  S  I WFW+ V+    E + RLLQFVTGT ++PL GF+ L G +G QKF I K  G    LP +HTCFN+LDLP Y S + L+E+LL AI E  EGFG
Sbjct:  759 LMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKV-GKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 920          
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36
Identity = 76/163 (46.63%), Postives = 105/163 (64.42%), Query Frame = 1
Query:    1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489
            ++ E R+T  I  Q   FLEGF E++P E +  F+++ELEL++ G+ D+D++D + NT Y  Y+  S  + WFW+ V+    E +ARLLQFVTGT +VP+ GF+ L G +G Q+F I K  G    LP +HTCFN+LDLP Y S   L E+L  AI E  EGF
Sbjct:  786 LMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKV-GKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEE-TEGF 946          
The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SMUF1_XENLA9.512e-3748.72E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laev... [more]
WWP2_HUMAN1.242e-3647.56NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Hom... [more]
SMUF2_MOUSE1.242e-3648.37E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus... [more]
SMUF2_HUMAN1.242e-3647.71E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens... [more]
SMUF2_DANRE1.242e-3646.41E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio ... [more]
HECW2_MOUSE1.622e-3648.70E3 ubiquitin-protein ligase HECW2 OS=Mus musculus ... [more]
HECW2_HUMAN2.119e-3648.70E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens ... [more]
WWP1_MOUSE3.614e-3646.34NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus... [more]
WWP1_HUMAN3.614e-3646.34NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Hom... [more]
SUDX_DROME3.614e-3646.63E3 ubiquitin-protein ligase Su(dx) OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionC01006E05SK Veg1 Citrus clementina cDNA clone C01006E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bp
GTAGTTGCGGAGCATCGTTTGACGACTGCTATTCGGCCTCAAATAAATGC
TTTTCTGGAGGGATTTACCGAACTAATTCCTGGGGAGTTGATATCTATCT
TCAATGACAAGGAATTAGAATTATTGATTAGTGGGCTTCCGGATATTGAT
TTGGATGACATGAGGGCAAATACGGAATATTCTGGATATAGTGCTGCATC
TCCTGTTATCCAGTGGTTTTGGGAGGTTGTTCAAGGGTTCAGCAAGGAGG
ATAAGGCTCGTCTTCTGCAGTTTGTGACTGGCACCTCAAAGGTGCCCTTG
GAAGGTTTCAGTGCACTTCAAGGAATTTCAGGTTCACAGAAGTTTCAAAT
ACACAAGGCATATGGCAGCATAGATCATTTGCCTTCTGCTCATACTTGTT
TCAATCAATTAGATTTGCCGGAATATCCTTCTAAGCAGCATCTAGAGGAG
AGACTGCTGCTTGCAATTCATGAAGGCAATGAAGGGTTTGGAT
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