CX287254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF1_MOUSE (E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36 Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474 R I Q A +GF ELIP L+ F+ KELEL+I GL IDL+D ++NT A S +++WFW+ V+ F +E +ARLLQFVTG+++VPL+GF ALQG +G+ + F IH + D+LP AHTCFN++D+P Y S + L E+LL A+ E Sbjct: 569 RFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE 724
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36 Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 16 RLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474 R I Q A +GF ELIP L+ F+ KELEL+I GL IDL+D ++NT A S +++WFW+ V+ F +E +ARLLQFVTG+++VPL+GF ALQG +G+ + F IH + D+LP AHTCFN++D+P Y S + L E+LL A+ E Sbjct: 595 RFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE 750
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 7.054e-32 Identity = 72/158 (45.57%), Postives = 102/158 (64.56%), Query Frame = 1 Query: 13 HRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIH-KAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHE 474 +R I Q A +GF ELIP L+ F+++ELEL+I G+ ID++D R NT + + + WFW+VV+ +S E +ARLLQFVTG+S+VPL+GF ALQG +G+ + F IH A +LP AHTCFN++DLP Y + Q L ++L A+ E Sbjct: 897 YRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHCTNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEE 1054
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.972e-31 Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPD-IDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAI 468 +V+ HRL IR Q + FL GF +LIP E I +FN+ EL++LISG D +D+DD+R NT Y+G Y A VI FWEV++ FS E++ + L+FVTG S+ PL GF L+ Q+ + S+D LP++ TC N L LP Y SK+ LE +L+ AI Sbjct: 863 LVSNHRLNFQIRQQSSHFLRGFQQLIPKEWIDMFNEHELQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAI 1020
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.330e-30 Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSG--YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 ++A++RL + ++ ++ FL+G EL+P L++IF++ ELELL+ G DI++ D +A+ G + V++WFW VV ++E+ ARLLQF TG+S++P GF+AL FQI A + LP+AHTCFNQL LP Y S + + L LAI EG EGFG Sbjct: 662 LLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDINVSDFKAHAVVVGGSWHFREKVMRWFWAVVSSLTQEELARLLQFTTGSSQLPPGGFAAL-----CPSFQIIAA-PTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFG 821
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 1.737e-30 Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSG--YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 ++A++RL + ++ ++ FL+G EL+P L++IF++ ELELL+ G DI + D +A+ G + V++WFW VV ++E+ ARLLQF TG+S++P GF+AL FQI A + LP+AHTCFNQL LP Y S + + L LAI EG EGFG Sbjct: 662 LLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAAL-----CPSFQIIAA-PTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFG 821
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.596e-26 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLP-DIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAI 468 +VA++RL IRP AF +G ++ E + +F+ +E+++LISG + L+D+++ T YSG YSA PVI+ FW VV+GF+ E+K +LL+FVT S+ PL GF L F IH ++ LP+A TC N L LPE+ + L +LL AI Sbjct: 922 LVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELY-----PAFCIHNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAI 1074
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25 Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISG-LPDIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHK---------AYG--SIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 +A+++L I P NAF G T+LI + +FN E L+SG DID+DD+R NT+Y+G YS +S I+ FWEV++GF ++ LL+FVT S+ PL GF LQ F IHK A G ++ LPSA TC+N L LP Y + E+LL AI N GF Sbjct: 971 MADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQ-----PTFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKLPTYKRASTMREKLLYAI-TSNAGF 1139
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25 Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLP-DIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAI 468 +VA++RL IR AF +G ++ E + +F+ +E+++LISG I L+D+++ T YSG YSA PVI+ FW VV+GF+ E+K +LL+FVT S+ PL GF L F IH ++ LP+A TC N L LPE+ + L +LL AI Sbjct: 922 LVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELY-----PAFCIHNGGSDLERLPTASTCMNLLKLPEFYDETLLRSKLLYAI 1074
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25 Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 19 LTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 L +I Q AF GF + + + +E+E+L+ G PD+D+ ++ +T+Y GY+ I++FW+VV GF + + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL LP Y SK+ L+++L++ I +EGFG Sbjct: 625 LNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGI-SNSEGFG 774 The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bpback to top |