CX287254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25 Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 19 LTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 L +I Q AF GF + + + +E+E+L+ G PD+D+ ++ +T+Y GY+ I++FW+VV GF + + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL LP Y SK+ L+++L++ I +EGFG Sbjct: 625 LNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGI-SNSEGFG 774
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.896e-25 Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPD-IDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEG 477 V +++L ++AF G + +I + +FN EL++LISG D IDLDD+++NTEY GY I FWEV+ F E+K L+FVT + PL+GF AL KF I A LP+A TC N L LP+Y +K L E+LL AI+ G Sbjct: 751 VTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNTEYGGYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKAL-----DPKFGIRNAGTEKYRLPTASTCVNLLKLPDYRNKTILREKLLYAINSG 904
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.395e-25 Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 19 LTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 L +I Q AF GF + + + +E+E+L+ G P++D+ ++ +T+Y GY+ I++FW+VV GF E + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL LP Y S++ L+++L++ I +EGFG Sbjct: 623 LNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNWLPVAHTCFNQLCLPPYKSRKDLKQKLIIGI-SNSEGFG 772
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.861e-24 Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLP-DIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +V+ + L + Q AF GFT++I +++F++ E+++L+ G P ID+DD+R +T Y+G Y SP I FWEV++ F +EDK ++FVT ++ P+ GF AL F I LP+A TC N L LP Y +KQ L ++LL A+ G GFG Sbjct: 868 LVSNYYLNARLSRQCRAFTNGFTQIIDPHWLAMFHESEIQILVGGDPVPIDIDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALM-----PSFCIRVNGEDETRLPTASTCVNLLKLPMYSTKQTLRDKLLTAVRSG-VGFG 1027
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 105.916 bits (263), Expect = 1.021e-22 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 7 AEHRLTTAIRPQINAFLEGFTELIPGE--LISIFNDKELELLISGLPDIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +++ L ++ Q AF GF ++ E L +F +E+ELLI G ++D + TEY G Y+ S +I+ FWE+V F+ E K LQF TGT + P+ G G K I K + LP++HTCFN L LPEY SK+ L+ERLL AI +GFG Sbjct: 718 SDYILNKSVEKQFKAFRRGF-HMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGL-------GKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYA-KGFG 873
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.021e-22 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 19 LTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPD--IDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 L +I P +F GF +I G +F +ELE L+ G + +D+ +R+ T Y G + SPV+QWFWE++ + +LL FVTG+ +VP G + + F+I + D LP +HTCFN++ L EY K+ L +L++A+ E ++G+G Sbjct: 685 LNRSIAPGFESFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTI-------PFRISRIRSGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEE-SQGYG 837
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.474e-21 Identity = 56/149 (37.58%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 46 NAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 +AF GF ++ G+++ +F EL+ ++ G + D ++ NTEY G Y A P I+ FWEV E K + L F+TG+ ++P+ G +L K I G ++LP +HTCFN LDLP+Y K+ L +L+ AI + NEGF Sbjct: 914 DAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSL-------KLVIQSTGGGEEYLPVSHTCFNLLDLPKYTEKETLRSKLIQAI-DHNEGF 1054
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.925e-21 Identity = 65/165 (39.39%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 7 AEHRLTTAIRPQINAFLEGFTELIPGE--LISIFNDKELELLISGLPDIDLDDMRANTEYSG-YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +++ L ++ Q AF GF ++ E L +F +E+ELLI G ++D + TEY G Y+ S VI+ FWE+V F+ E K L F TGT + P+ G G K I K + LP++HTCFN L LPEY SK+ L RLL AI +GFG Sbjct: 728 SDYILNKSVEKQFKAFRRGF-HMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLLFTTGTDRAPVGGL-------GKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLNVRLLKAITYA-KGFG 883
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (Probable E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.284e-21 Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 40 QINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ-KFQIHKAYGSIDH-LPSAHTCFNQLDLPEYPSKQHLEERLLLAIH 471 Q+ A EG ++P L+S+F ELE ++ G PDI L +++ Y G ++ +IQWFWEV++ FS +++ L+FV G +++P + G Q+ Y DH LP ++TCF L LP Y KQ LEE+L AIH Sbjct: 4645 QVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLIQWFWEVMESFSNTERSLFLRFVWGRTRLP----RTIADFRGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4786
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.289e-21 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 40 QINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ-KFQIHKAYGSIDH-LPSAHTCFNQLDLPEYPSKQHLEERLLLAIH 471 Q+ A EG ++P L+S+F ELE ++ G PDI L +++ Y G ++ ++QWFWEV++ FS +++ L+FV G +++P + G Q+ Y DH LP ++TCF L LP Y KQ LEE+L AIH Sbjct: 4647 QVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLVQWFWEVMESFSNTERSLFLRFVWGRTRLP----RTIADFRGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4788 The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bpback to top |