CX287254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17 Identity = 46/145 (31.72%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 40 QINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ-KFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIH 471 Q+ A +G +++IP L+S+F+ EL+ ++ G PDI L +++ Y G+ +S ++ WFWEV++ F+ ++++ L+FV G +++P + G Q+ + LP ++TCF L +P Y K L E+L AIH Sbjct: 4734 QVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLP----RTIADFRGRDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAIH 4874
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD3_MOUSE (Probable E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus GN=Hectd3 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.062e-15 Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 34 RPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIH 471 + Q+ A G +++P ++ + +ELE + G P++ +D +R T + + + +Q+FWE + F+ ED++R L+FVTG S++P + + Y + D LP + TC + L LP Y S + EE+L A + Sbjct: 712 KEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRFEDFEPSDTRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPARIYI----------YPDKLGYETTDALPESSTCSSTLFLPHYASAKVCEEKLRYAAY 847
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HECD3_HUMAN (Probable E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.062e-15 Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 34 RPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIH 471 + Q+ A G +++P ++ + +ELE + G P++ +D +R T + + + +Q+FWE + F+ ED++R L+FVTG S++P + + Y + D LP + TC + L LP Y S + EE+L A + Sbjct: 712 KEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRFEDFEPSDSRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPARIYI----------YPDKLGYETTDALPESSTCSSTLFLPHYASAKVCEEKLRYAAY 847
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 19 LTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYS----GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 L + Q ++F +GF + P + F +EL+ L+ G D D + E GY+ S +++ +E++ F E + LQFVTG+ ++P+ GF +L + D LPS TC N L LP+Y S + + E+LL+A EG + F Sbjct: 1830 LNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCG-SKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSF 1989
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15 Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTE---------LIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQI---HKAYG--SIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 V + L I Q+ AF+EGF++ L P EL+ IF E + ++ L N E+ GY+ S +I F ++ F K ++ LQF+TG+ K+P+ GF +L + KF + H G + ++LPS TC N L LP+Y SK + RL AI EG F Sbjct: 1317 VIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYT------NLNAEH-GYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSL-----NPKFTVVLKHAEDGLTADEYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAF 1480
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-14 Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDD---MRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 V ++ + ++ Q+ AF GF+ + P + + + EL L G D D M++ GY+ SP IQ ++ + +++ LQF+TG+ K+P+ GF+ L + Y D+LPS TC N L LPEY S + L RL AI EG F Sbjct: 1481 VIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLF-GTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSF 1644
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: MUG30_SCHPO (Probable E3 ubiquitin-protein ligase mug30 OS=Schizosaccharomyces pombe GN=mug30 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14 Identity = 53/184 (28.80%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 10 EHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDI------------DLDDMRA-------------NTEYSGYSAAS--PVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGN 480 ++ L T ++ Q +AF +GF ++ G IS+F D E+ LI G ++ D D A ++Y +S S +I WFW+++ +S + + L FVTG+ ++P G Q +I D LP +HTCFN L + EY S++ L+++L A+ E N Sbjct: 626 DYLLNTTVKKQFSAFFDGFMKVCGGNAISLFQDNEISKLIRGSEEVIDWELLKNVCVYDFYDQNAISNSISESEPSMTASKYLCHSFVSKRKIILWFWDLISHYSLKMQKLFLIFVTGSDRIPATGAHNFQ-------LRISVLGPDSDQLPISHTCFNHLCIWEYSSREKLKKKLDTALLETN 802
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBR5_RAT (E3 ubiquitin-protein ligase UBR5 (Fragment) OS=Rattus norvegicus GN=Ubr5 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14 Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 7 AEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSA--ASPVIQ---WFWEVVQGFSKEDKARLLQFVTGTSKVPL--EGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 AEHR+ ++A +G +++P + ++ LL++G ++++ + + T ++ S A ++Q WFW +V+ S ++ L+ F T + +P EGF + I+ HLP+A+TC ++L +P Y SKQ L+++LLLAI N GF Sbjct: 760 AEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVERMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDD--------QHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGF 919
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBR5_MOUSE (E3 ubiquitin-protein ligase UBR5 OS=Mus musculus GN=Ubr5 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14 Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 7 AEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSA--ASPVIQ---WFWEVVQGFSKEDKARLLQFVTGTSKVPL--EGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 AEHR+ ++A +G +++P + ++ LL++G ++++ + + T ++ S A ++Q WFW +V+ S ++ L+ F T + +P EGF + I+ HLP+A+TC ++L +P Y SKQ L+++LLLAI N GF Sbjct: 2632 AEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDD--------QHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGF 2791
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UBR5_HUMAN (E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14 Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 7 AEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSA--ASPVIQ---WFWEVVQGFSKEDKARLLQFVTGTSKVPL--EGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGF 489 AEHR+ ++A +G +++P + ++ LL++G ++++ + + T ++ S A ++Q WFW +V+ S ++ L+ F T + +P EGF + I+ HLP+A+TC ++L +P Y SKQ L+++LLLAI N GF Sbjct: 2639 AEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDD--------QHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGF 2798 The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bpback to top |