CX287255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA6_RAT (GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++LVG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP + E K+I C +A G HAVL +++EAA LQ +FG I Y I+VF Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILSPQNQPEATAKKI--CDILASPGPHAVLLVIQVGRYTTEDQEAA-RCLQEIFGNGILAYTILVF 223
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA1_MOUSE (GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.656e-13 Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVG-KEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++LVGRTG GKSATGNSILG++ F SR + VT +C + + G V V+DTP +F G E +C ++ G HA+L Q+ + AL +++ LFGK++ +VVF Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWA-GWQVEVVDTPDIFSSEIPRTDPGCVETARCFVLSAPGPHALLLVTQLGRFTMQDSQ-ALAAVKRLFGKQVMARTVVVF 127
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA8_MOUSE (GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++L+G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF + SE + + +C+ + D H VL +E+ + + G K + +MIVVF Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFSSLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMIVVF 171 HSP 2 Score: 72.0182 bits (175), Expect = 2.392e-12 Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSE----FVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++L+GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP F + G+E + +EI C+ + ++G+ + QE+E + L+ F + I YMIV+F Sbjct: 478 IILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPS-FIQTPGTEKDPSRLKEEIHHCLSLCEEGM-KIFVLVLQLGRFTQEDEVVVEQLEASFEENIMKYMIVLF 601
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA5_MOUSE (GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++LVG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+ A ++ + K+I C + G H VL E+ A+ ++ +FG + +MIV+F Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPH-VLLLVTQLGRFTAEDAMAVRMVKEVFGVGVMRHMIVLF 149
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA1_HUMAN (GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 141 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVG-KEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 S R ++LVGRTG GKSATGNSILG+R F SR ++ VT C + D V V+DTP +F G +E C ++ G HA+L Q+++ A+ ++ +FG+ + +M++VF Sbjct: 22 SRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRAC-TTGSRRWDKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQ-AVRQVRDMFGEDVLKWMVIVF 151
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA8_RAT (GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++L+G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF E + + +C+ + D VL +E++ + +Q +FG + + +MIVVF Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFSSLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMIVVF 170 HSP 2 Score: 72.4034 bits (176), Expect = 1.831e-12 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSE----FVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++L+GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L S G+E + KEI +C+ + V QE+EA + L+ F + I YMIV+F Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQMS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQLGRFTQEDEAVVEQLEASFEENIMKYMIVLF 601
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA5_RAT (GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 150 NGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 +G ++LVG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DTP +F+ ++ + K+I C M G H VL E+ A+ ++ +FG + YMIV+F Sbjct: 42 SGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFESKIQNQDMDKDIGNCYLMCAPGPH-VLLLVTQLGRYTVEDAMAVRMVKQIFGVGVMRYMIVLF 167
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA3_MOUSE (GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.074e-12 Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++LVG++G GKSATGNS+L R AF+SR VT T + + T +G+ + V+DTP +F+ A ++ + K+I C + G H VL E+ A+ ++ +FG + +MIV+F Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPH-VLLLVTQLGRFTAEDVMAVRMVKEVFGVGVMRHMIVLF 145
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA6_HUMAN (GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++L+G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP + E V I + I ++ G HAVL E++ + LQ +FG + + I+VF Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILSPQVSPE-VADAICQAIVLSAPGPHAVL-LVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVF 162 The following BLAST results are available for this feature:
BLAST of CX287255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287255 ID=CX287255; Name=CX287255; organism=Citrus clementina; type=EST; length=586bpback to top |