CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20
Identity = 62/191 (32.46%), Postives = 98/191 (51.31%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYL--PRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAI 564
            T + G+  F+DLT EE+  +Y     G +R   ++ +  R +     GE++P + DWRK  G ++ VK Q SC  CWA +    +E +  I     + LS QEL+DC     +GC GG +  AF  +++N G+ +E DYP++   G    +R    K  KV  I D+  +P N++K         P++V I
Sbjct:   83 TAEFGVTPFSDLTEEEFGRLY-----GHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDCGRC-GDGCRGGFVWDAFITVLNNSGLASEKDYPFQ---GQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTI 264          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.252e-20
Identity = 69/204 (33.82%), Postives = 106/204 (51.96%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLK--------SKRSDRYLPRVGEA------------LPDSVDWRKKGAVAEVKDQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAI 564
            Y + LN+F+DL++EE++++Y         TSL         S ++  Y+ ++ +A              ++++W +  AV+ +KDQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+ I + G+  E + PY  I   C    KN   V ID    +  ND   + K++   P  V I
Sbjct:  160 YSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEY-IHSKGVSFESEVPYTGIVSPCKPSIKNK--VFIDSISILKGND--VVNKSLVISPTVVGI 357          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.252e-20
Identity = 57/165 (34.55%), Postives = 94/165 (56.97%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFG-AKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNG-GIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDY 492
            EN T   G+N+F+ L  EE++++YLG+++  A R   + +R    +P V  +LP   DWR K  V  V++Q  CG CWAFS ++A+E    I   SL  LS Q+++DC  + N GC GG    A  ++ +    +  +  YP+KA++G C  + ++   V++ D+
Sbjct:   52 ENSTAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP---IPNV--SLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDF 210          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.528e-19
Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYL-----GARFGAKRTSLKSKRSDRYLPRVGEALP------------DSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSV 558
            Y  G+NRF+DLT  E+  ++       A +      L    +  YL  + +AL             +++DWR+  +V  VKDQ +CG CWAFST+ +VEG           LS QEL+DCD S++ GC GGL++ A+E++   G +  + D P+  +D +       AK V++  Y       ++ + +++ + P SV
Sbjct:  165 YVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGENLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD-SFSNGCQGGLLESAYEYVRKYGLVSAK-DLPF--VDKARRCSVPKAKKVSVPSYH--VFKGKEVMTRSLTSSPCSV 356          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 60/189 (31.75%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR----KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAI 564
            T + G+  F+DLT EE+  +Y G R  A       +      P   E++P S DWRK   A++ +KDQ +C  CWA +    +E + +I     + +S QEL+DC     +GC+GG +  AF  +++N G+ +E DYP++   G    +R    K  KV  I D+  +  N+ +  Q      P++V I
Sbjct:   83 TAEFGVTPFSDLTEEEFGQLY-GYRRAAGGVPSMGREIRSEEPE--ESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRC-GDGCHGGFVWDAFITVLNNSGLASEKDYPFQ---GKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTI 264          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18
Identity = 58/167 (34.73%), Postives = 88/167 (52.69%), Query Frame = 1
Query:   28 LNRFADLTNEEYRSMYLGA--RFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDV-PLNDEK 519
            +N+F+D++ EE+++ YL +   + A +         +        +P+ +D R  G V ++K+Q +CGSCWAFS +A VE          + LSEQELVDC + +  GC G  +     +I  NG ++ E  YPYKA +G C   R NAK   I D   + P N +K
Sbjct:   65 INQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQH--GCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREGRCQ--RPNAKRYGIKDLCQIYPPNGDK 226          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIID-NGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEK 519
            +EN T   G+N+F+ L  EE++++YL ++    +    S      +P V  +LP   DWR K  V +V++Q  CG CWAFS + AVE    I    L  LS Q+++DC  SYN  GCNGG    A  ++      +  + +YP+KA +G C  +  +    +I  Y     +D++
Sbjct:   60 SENSTAFYGINQFSYLFPEEFKAIYLRSK--PSKFPRYSAEVHMSIPNV--SLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDC--SYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQE 228          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 64/195 (32.82%), Postives = 100/195 (51.28%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPD-------SVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            E+ TY++G N+F  L++EE+  +YL             ++SD  +  +G +LP+       +VDWR       VK+QG C S WAFS   ++E    I     I+ S Q++VDCD + N GC+GG   YA E+++   G+ +  +YPY A + +C   R       I+ Y  V    +  LQ  + N P+SV +E
Sbjct:   66 EDVTYQMGENQFMTLSHEEFVDLYL-------------QKSDSSVNIMGASLPEVQLEGLGAVDWRN---YTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN-NTGCSGGYNAYAMEYVL-RVGLVSSTNYPYVAKNQTCKQSRNG--TYFINGYSFVG-GSQSNLQYYLNNYPISVGVE 239          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17
Identity = 58/176 (32.95%), Postives = 89/176 (50.57%), Query Frame = 1
Query:    4 ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLK-SKRSDRYLPR-----------------VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGS-CDTYRKNAKV 474
            +N  YK  +N+F+D + EE +  +            K SK  + +L                   +   +P+ +D+R+KG V E KDQG CGSCWAF+++  +E +      +++S SEQE+VDC    N GC+GG   Y+F +++ N  +   D+Y YKA D   C  YR   KV
Sbjct:  264 KNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD-NFGCDGGHPFYSFLYVLQN-ELCLGDEYKYKAKDDMFCLNYRCKRKV 437          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 56/184 (30.43%), Postives = 90/184 (48.91%), Query Frame = 1
Query:   19 KVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAI 564
            K  +N  +DL+ +E+++ YL     F   +T                 +P  +D R    V  ++ QG CGSCWAFS +AA E        + + LSEQELVDC + +  GC+G  +    E+I  NG ++ E  YPY A +  C   R N++   I +Y  +   D K +++A+     ++A+
Sbjct:   61 KGAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVNVPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCASQH--GCHGDTIPRGIEYIQQNGVVE-ERSYPYVAREQRC--RRPNSQHYGISNYCQIYPPDVKQIREALTQTHTAIAV 239          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATW_FELCA3.079e-2032.46Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CYSP_THEAN5.252e-2033.82Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATO_MOUSE5.252e-2034.55Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CYSP_THEPA1.528e-1930.81Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATW_HUMAN1.294e-1831.75Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
PEPT1_PSOOV6.420e-1834.73Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATO_HUMAN1.095e-1733.14Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CATL3_PARTE1.095e-1732.82Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CYSP_PLAFA1.868e-1732.95Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
PEPT1_DERFA3.186e-1730.43Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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