CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.276e-38
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGG 573
            +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+E+ YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G
Sbjct:   73 FRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAG 253          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.585e-38
Identity = 86/186 (46.24%), Postives = 112/186 (60.22%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  NGGID+ED YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   PVSV+I+
Sbjct:   70 TYELAMNHLGDMTSEEVVQKMTGLRVPPSRSF---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSID 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 5.585e-38
Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+ED YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   P+SV+I+
Sbjct:   70 TYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSID 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.527e-38
Identity = 88/185 (47.57%), Postives = 109/185 (58.92%), Query Frame = 1
Query:   22 VGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            +GLN FAD+TNEEYR+ YLG  F A  +SL+   S++     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II+NGGIDTE  YP+ A    C  Y  +     +  Y +V    E  L   V   P SVAI+
Sbjct:   72 LGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKC-KYNPSNIGAELSSYVNVTSGSESDLAAKVTQGPTSVAID 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.244e-37
Identity = 82/190 (43.16%), Postives = 118/190 (62.11%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C  +  N    T   Y  +    E AL+ A  +  P+SVAI+
Sbjct:   64 TYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC-RFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAID 243          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.244e-37
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I  NGGIDTE+ YPYK ++G C    +NA V  +D   ++ LN E  L+ AV   +PVSVA +
Sbjct:  102 YRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSV-NITLNAEDELKNAVGLVRPVSVAFQ 281          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.625e-37
Identity = 85/187 (45.45%), Postives = 116/187 (62.03%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            +Y++G+NRFAD++ EE+R+  LGA      T   + R    +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY+ ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA E
Sbjct:   99 SYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHR----MRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSV-NITLGAEDELKDAVGLVRPVSVAFE 280          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.122e-37
Identity = 89/189 (47.09%), Postives = 111/189 (58.73%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIE 567
            +Y VG+N   D+T EE          G+ R      RS        + LPDSVDWR+KG V  VK QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF++IID   ID+E  YPYKA+D  C  Y    +  T   Y ++P  DE+AL++AVA + PVSV I+
Sbjct:   70 SYSVGMNHMGDMTPEEVIGY-----MGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMDEKC-LYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGID 251          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.772e-37
Identity = 87/187 (46.52%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY++ +N   D+TNEE      G +  A      S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+ED YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+
Sbjct:   70 TYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.772e-37
Identity = 87/187 (46.52%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY++ +N   D+TNEE      G +  A      S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+ED YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+
Sbjct:   70 TYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATL2_BOVIN4.276e-3845.74Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATK_RAT5.585e-3846.24Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE5.585e-3845.70Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP6_DICDI9.527e-3847.57Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP1_HOMAM1.244e-3743.16Digestive cysteine proteinase 1 OS=Homarus america... [more]
ALEU_HORVU1.244e-3746.24Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_MAIZE1.625e-3745.45Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATS_RAT2.122e-3747.09Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATK_MACMU2.772e-3746.52Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA2.772e-3746.52Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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