CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.003e-36
Identity = 84/187 (44.92%), Postives = 113/187 (60.43%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+ED YPY   D +C  Y    K      Y ++P  +EKAL++AVA   PVSVAI+
Sbjct:   71 TYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 251          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.165e-35
Identity = 88/188 (46.81%), Postives = 115/188 (61.17%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDD--YEDVPLNDEKALQKAVAN-QPVSVA 561
            ++ + +N F D+TNEE+R +  G ++   R   K K+  +R LP +    P SVDWR+KG +  VKDQG CGSCWAFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F ++ +NGG+D+E  YPY   +G   T R N K    +D  + D+P + EK L KAVA   P+SVA
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHR---KGKQFQERLLPEI----PTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPY---EGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVA 191          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.165e-35
Identity = 87/192 (45.31%), Postives = 115/192 (59.90%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            A N T+K+GLN+F+D++ +E +  YL +          S     YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  ED YPY+  DG C  Y+ +  +  + D  ++ LNDE+A+ +AVA + PVS A E
Sbjct:   70 ARNHTFKMGLNQFSDMSFDELKRKYLWSE-----PQNCSATKSNYLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDC-KYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFE 254          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 79/189 (41.80%), Postives = 117/189 (61.90%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGG 576
            +Y +G+N+F D+TN E+ + Y G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII N G+ +   YPYKA  G+C T    N+  +T   Y  V  N+E+ +  AV+NQP++ A++  G
Sbjct:   78 SYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAYIT--RYTYVQRNNERNMMYAVSNQPIAAALDASG 259          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 2.594e-35
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = 1
Query:   16 YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGG 576
            Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  N GI     YPY A   +C   +     V  +    V  N+E +L  A+A+QPVSV +E  G
Sbjct:   89 YWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQN-GIHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAG 270          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.594e-35
Identity = 84/189 (44.44%), Postives = 116/189 (61.38%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            T+ + +N+F D+T EE+ ++  G          +S     + P+  E  P +  VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N GIDTE  YPY+A DGSC  +  N+   T   + ++    E  LQ+AV +  P+SV I+
Sbjct:   64 TFNLAMNKFGDMTLEEFNAVMKG------NIPRRSAPVSVFYPKK-ETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC-RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTID 244          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.388e-35
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            A N T+K+GLN+F+D++ +E R  YL +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  ED YPYK  D  C  ++ +  +  + D  ++ +NDE+A+ +AVA   PVS A E
Sbjct:   70 AGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHC-KFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFE 254          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.425e-35
Identity = 83/187 (44.39%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 567
            T+KV +N+F D+TNEE+ ++  G + G++      +    +    G    D VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DNGGIDTE  YPY+A D SC     +   +     E    + E+ALQ+AV+   P+SVAI+
Sbjct:   64 TFKVAMNQFGDMTNEEFNAVMKGYKKGSR-----GEPKAVFTAEAGPMAAD-VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVE--VQHTEEALQEAVSGVGPISVAID 242          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.288e-34
Identity = 81/189 (42.86%), Postives = 111/189 (58.73%), Query Frame = 1
Query:   19 KVGLNRFADLTNEEYRSMY-LGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIEGGGM 579
            K G+  FAD+T+ EY+    L  R  AK T      S   +P     LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA    C  + +    V +  + D+P  +E A+Q+  +AN P+S+ I    M
Sbjct:  351 KYGITEFADMTSSEYKERTGLWQRDEAKATG----GSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM 533          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.682e-34
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLND-------EKALQKAVANQPVSVAIE 567
            ++++GLN+FAD+T +E+   YL A    K  S + K +++ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T+DDYPY+A +G C   +   K VTID YE + ++D       E+A   A+  QP+SV+I+
Sbjct:   87 SHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDK-VTIDGYETLIMSDESTESETEQAFLSAILEQPISVSID 276          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATK_PIG4.003e-3644.92Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATL6_HUMAN1.165e-3546.81Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATH_BOVIN1.165e-3545.31Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ANAN_ANACO1.521e-3541.80Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
PAPA4_CARPA2.594e-3543.32Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP2_HOMAM2.594e-3544.44Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATH_PIG3.388e-3544.79Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CYSP3_HOMAM4.425e-3544.39Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPR1_DROME1.288e-3442.86Putative cysteine proteinase CG12163 OS=Drosophila... [more]
P34_SOYBN1.682e-3441.54P34 probable thiol protease OS=Glycine max PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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