CX287280

Overview
NameCX287280
Unique NameCX287280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.065e-33
Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGM 579
            TY + +N+F+D+T+EE+R M +  +  A R +L+          VG A P+S+DWR KG V  V++QG CGSCWA ST AA+E  + I +GS + LS Q+LVDC TSY N GCNGG     FE++ DN G++++ DYPY   +  C    K+  VV +  Y+ V  + E +L++AV    P+S  + G  M
Sbjct:   67 TYYLAINKFSDITDEEFRDMLM--KNEASRPNLEGLEVADLT--VGAA-PESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTAS-ETSLKEAVGTIGPISAVVFGKPM 250          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.227e-33
Identity = 74/194 (38.14%), Postives = 109/194 (56.19%), Query Frame = 1
Query:   25 GLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGM 579
            G+ +F+DLT  E+R  YLG R   +    +   S    P +  + LPD  DWR  GAV  VK+QGSCGSCW+FS   A+EG + + TG L  LSEQ+ VDCD         S + GCNGGLM  AF ++   GG+++E DYPY   DG C  + K+  V ++ ++  V +++ +     + + P+++ I    M
Sbjct:   92 GVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKC-KFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYM 284          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.227e-33
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 1
Query:    7 NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            N T+K+GLN+F+D++  E +  YL +          S     YL   G   P S+DWRKKG  V+ VK+QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  ED YPY   +G C  +     V  + +  ++ LNDE A+ +AVA   PVS A E
Sbjct:   70 NHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC-KFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFE 252          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.579e-32
Identity = 79/192 (41.15%), Postives = 111/192 (57.81%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV-----GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAV-ANQPVSVAIE 567
            TY +GLN+F D+T EE+++ YL         +  S+ SD     V       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A+++ +   G++TE  YPY A++G C  Y K   V  +  Y  V    E  L+  V A +P +VA++
Sbjct:   64 TYTLGLNQFTDMTFEEFKAKYL---------TEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPYTAVEGQC-RYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVD 244          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.811e-32
Identity = 80/190 (42.11%), Postives = 110/190 (57.89%), Query Frame = 1
Query:    7 NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 567
            N T+K+ LN+F+D++  E +  +L +          S     YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  ED YPY   D SC  +     V  + +  ++ LNDE A+ +AVA   PVS A E
Sbjct:   70 NHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC-RFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFE 252          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN--GGIDTEDDYPYKAIDGSCDTYRKNAKVV--TIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            A N     G+  F+D+T EE+R+ Y   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++  G + TE  YPY + +G     + N   +   I D+ D+P +++        N P+++A++
Sbjct:   77 AANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVD 265          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARF----GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGM 579
            T + G+ +F+DLT EE+ ++YL        G K +  KS         + +  P   DWRKKGAV EVK+QG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TEDDY Y+    +C+   + AKV  I+D  ++  N+ K         P+SVAI   GM
Sbjct:  206 TAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKS---------INDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD-KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVY-INDSVELSRNENKIAAWLAQKGPISVAINAFGM 387          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 8.637e-31
Identity = 73/192 (38.02%), Postives = 106/192 (55.21%), Query Frame = 1
Query:   19 KVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            K G+N+FADL+++E+++ YL  +       L    +D        ++P + DWR +GAV  VK+QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+   +        I ++  +P N+       V+  P+++A +
Sbjct:   74 KFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV--ADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAAD 263          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.473e-30
Identity = 82/190 (43.16%), Postives = 113/190 (59.47%), Query Frame = 1
Query:   13 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR--SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEG 570
            +Y   LN  ADLT+EE+  +  G R    +T L+ KR  S+ Y     E LPD VDWR KGAV  V++QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YPY   +  C  ++++  VVT + + ++   DE AL+ AVA + PV V I G
Sbjct:  134 SYTTALNDLADLTDEEFM-VRNGLRL-PNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYPYVGTEQRC-RWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISG 319          
BLAST of CX287280 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.629e-29
Identity = 76/197 (38.58%), Postives = 117/197 (59.39%), Query Frame = 1
Query:    1 AENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEDDYPYKAIDGSCDTYRKNAKVVT---IDDYEDVPLNDEKALQKAVANQPVSVAIE 567
            A N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TED YPY + +G       ++++V    ID +  +  +++        N P+++A++
Sbjct:   74 ARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALD 266          
The following BLAST results are available for this feature:
BLAST of CX287280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATLL_PHACE7.065e-3341.88Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP1_MAIZE9.227e-3338.14Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATH_RAT9.227e-3342.63Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATLL_FASHE4.579e-3241.15Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATH_MOUSE7.811e-3242.11Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP_TRYBB2.968e-3139.90Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATF_MOUSE2.968e-3141.45Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP1_DICDI8.637e-3138.02Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_BRUPA1.473e-3043.16Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
LMCPB_LEIME1.629e-2938.58Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]

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Properties
Property NameValue
Genbank descriptionC01006G09SK Veg1 Citrus clementina cDNA clone C01006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287280 ID=CX287280; Name=CX287280; organism=Citrus clementina; type=EST; length=581bp
GCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGAC
CAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAA
GGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGC
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGC
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