CX287284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAAB (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAA9 (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain JH9) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAA8 (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain NCTC 8325) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAA3 (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain USA300) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAA2 (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain JH1) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAA1 (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=carB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.262e-22 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 LN+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 LNIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 1.262e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STRCO (Carbamoyl-phosphate synthase large chain OS=Streptomyces coelicolor GN=carB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.640e-22 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDA-YLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDL---GFTKEV-------IPKHVSVKEAVLPFEKF-----QGWDVLLGPEMISTG 295 + V GL+N Q+A+ +GD Y+LEANPRASRTVPF SKA PLAK AA + G ++ +L G + + +SVKEAV+P+ +F +G D +LGPEM STG Sbjct: 823 VGVRGLINIQFAL--AGDILYVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAELRAEGLLPALGDGGTLPLDAPISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTG 933 HSP 2 Score: 49.2914 bits (116), Expect = 1.640e-22 Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLK 528 EVMGID F A+AK+Q A LP G F+S+ + K + A + GF +++TSGTA ++ GI V K Sbjct: 934 EVMGIDSVFGTAYAKSQAGAYGPLPTKGRAFISVANRDKRSMIFPARELVAHGFELMATSGTAEVLKRNGINATVVRK 1011
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_CLOAB (Carbamoyl-phosphate synthase large chain OS=Clostridium acetobutylicum GN=carB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.641e-22 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 L V GLMN QY + + Y++E NPRASRTVP +SK G P+ K A +++GK+L +LG+ ++ K +VK V EK D+ LGPEM STG Sbjct: 813 LEVKGLMNIQY-VYDGENVYVIEVNPRASRTVPILSKVTGVPMVKLAVEILTGKNLKELGYGVDLKKDNKLYAVKVPVFSNEKLANVDIYLGPEMRSTG 910 HSP 2 Score: 48.1358 bits (113), Expect = 1.641e-22 Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPL-SGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVE 516 EVMGID F +A K AAG ++P G +++S+ D+ K I + + + G+ I ++ GT F++ +GI E Sbjct: 911 EVMGIDSDFEVAIYKGFRAAGIEVPKDGGNLYVSIKDVDKQESVPIIKKYTEFGYKIYASLGTGKFLQKQGIDCE 985
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_LACS1 (Carbamoyl-phosphate synthase large chain OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=carB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.135e-22 Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKH--VSVKEAVLPFEKFQGWDVLLGPEMISTG 295 L G+MN Q+ I + +AY+LE NPRASRTVPF+SK G +A+ A V+ G+SL + G+ + + V VK V F K D LGPEM STG Sbjct: 811 LKCVGIMNIQFIIHNN-EAYVLEVNPRASRTVPFLSKITGIEMAQVATRVILGESLAEQGYQSGLYRESDMVHVKAPVFSFSKLADVDSFLGPEMKSTG 908 HSP 2 Score: 51.9878 bits (123), Expect = 2.135e-22 Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D +F A KA A +LP +G V L++ D K + +A+ F IG+ + +T GT+ F+ G+ V+ V K+ Sbjct: 909 EVMGSDYTFEKALYKAFTGAKMELPDNGNVLLTIEDKDKDAVLPLAKRFSKIGYRMFATEGTSQFLRENGLFVQTVDKL 987
BLAST of CX287284 vs. ExPASy Swiss-Prot
Match: CARB_STAAW (Carbamoyl-phosphate synthase large chain OS=Staphylococcus aureus (strain MW2) GN=carB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.136e-22 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 5 LNVCGLMNCQYAITTSGDAYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP--KHVSVKEAVLPFEKFQGWDVLLGPEMISTG 295 +N+ GL+N Q+ I G Y+LE NPR+SRTVPF+SK P+A+ A + G+ L D+G+ + V P + V VK V F K + D+ LGPEM STG Sbjct: 811 INIIGLINIQFVIAHDG-VYVLEVNPRSSRTVPFLSKITDIPMAQLAMRAIIGEKLTDMGYQEGVQPYAEGVFVKAPVFSFNKLKNVDITLGPEMKSTG 908 HSP 2 Score: 43.8986 bits (102), Expect = 2.136e-22 Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 295 EVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAEAFLDIGFTIVSTSGTAHFVELKGIAVERVLKM 531 EVMG D + A K +G ++ GTV ++++D K + ++A+ ++G+ I++TSGTA+ + I E V K+ Sbjct: 909 EVMGKDTTLEKALFKGLTGSGVEVKDHGTVLMTVSDKDKEEVVKLAQRLNEVGYKILATSGTANKLAEYDIPAEVVGKI 987 The following BLAST results are available for this feature:
BLAST of CX287284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287284 ID=CX287284; Name=CX287284; organism=Citrus clementina; type=EST; length=533bpback to top |