CX287287

Overview
NameCX287287
Unique NameCX287287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17
Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 1
Query:  286 APDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            A D   E  E+QAEV +L+ L++HSLYS+K++FLREL+SNASDA+DKLRF S+ + SLL   GDL IR+  D +
Sbjct:    2 ATDAHKETLEFQAEVQQLLHLMIHSLYSNKDIFLRELISNASDAIDKLRFQSLQDESLLEGEGDLRIRVSVDKD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17
Identity = 40/70 (57.14%), Postives = 58/70 (82.86%), Query Frame = 1
Query:  298 SGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            +GE FE+QAE+++LM LI++++YS+KE+FLREL+SNASDALDK+R+ ++++P  L    DL IRI P PE
Sbjct:    2 AGETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPE 71          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            E F+++AE+S+LM LI++++YS+KE+FLREL+SNASDALDK+R+ S+++P  L    DL IRI PD EN
Sbjct:    5 ETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKEN 73          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16
Identity = 40/70 (57.14%), Postives = 57/70 (81.43%), Query Frame = 1
Query:  298 SGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            + E FE+QAE+++LM LI++++YS+KE+FLREL+SNASDALDK+R+ S+++P  L    DL IRI P PE
Sbjct:    2 ASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPE 71          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.452e-16
Identity = 38/68 (55.88%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            EK ++QAEV +L+D++VHSLYS+KE+FLREL+SNASD+ D+LR+ ++TEP LL    +  IR+ PD +
Sbjct:    4 EKRQFQAEVGKLLDIVVHSLYSNKEIFLRELISNASDSCDRLRYGAITEPDLLDGDSEFRIRLVPDKD 71          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.452e-16
Identity = 40/71 (56.34%), Postives = 57/71 (80.28%), Query Frame = 1
Query:  298 SGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            S E FE+QAE+S+L+ LI++++YS+KE+FLREL+SN SDALDK+R+ ++++PS L    DL I I PD EN
Sbjct:    2 SSETFEFQAEISQLLSLIINTVYSNKEIFLRELISNFSDALDKIRYKALSDPSKLESDKDLRIDITPDKEN 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.897e-16
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            EK  +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA+DKLRF  + +PSLL   G+L IRI  D +
Sbjct:    6 EKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQ 73          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.897e-16
Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDP 504
            E   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++  P+LL +  DL IRI+ DP
Sbjct:    6 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPALLENDADLAIRIEADP 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.235e-16
Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKP 498
            DT+ E   +QAEV+ L++L+VHS+YS  ++FLREL+SNASDALDKLR+ S+  P+L+ D G+ +IRI P
Sbjct:    5 DTASETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVP 73          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.235e-16
Identity = 38/71 (53.52%), Postives = 59/71 (83.10%), Query Frame = 1
Query:  295 TSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            +S E +E+QAE+++LM LI++++YS+KE+FLREL+SNASDALDK+R+ S+++P +L    +L IR+ P PE
Sbjct:    2 SSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPE 72          
The following BLAST results are available for this feature:
BLAST of CX287287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
HTPG_ALHEH4.991e-1756.76Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HSC82_YEAST4.991e-1757.14ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP90_SCHPO1.112e-1657.97Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP82_YEAST1.112e-1657.14ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HTPG_MAGSA1.452e-1655.88Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HSP82_AJECA1.452e-1656.34Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HTPG_RALSO1.897e-1661.76Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_RALME1.897e-1661.19Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_RHOP23.235e-1656.52Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HSP82_ASHGO3.235e-1653.52Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionC01006H04SK Veg1 Citrus clementina cDNA clone C01006H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287287 ID=CX287287; Name=CX287287; organism=Citrus clementina; type=EST; length=557bp
GTTCAAACCATCTTATTAAGCCAGCCCATTATCTTCTTCTCTCTCTGTAT
TCGAAGCCTTTTAATGGCTCCAGTTCTGAGCAGAACATTAGCCACTACCT
CTTTAGTGTCACTTCCAACTTCAACTCCTTTTTCTTTTAAACACTCCAAC
AACAAGGCCTTCAATTTCAGAAGCGCTTTTTTGCCGAGAAGTGGCGGCTT
AACTTGTGCTGGATTGAAGTGGAACCTTCAGAAGAGGAATAAAAGAGTCG
GGATACGGTGTGATGCTGCTGTTGCTGACAAAGAGGCCCCTGATACTTCT
GGTGAGAAGTTCGAGTACCAAGCCGAGGTCAGTCGCCTGATGGACTTGAT
TGTTCATAGTCTGTACAGCCACAAGGAGGTGTTCCTGCGAGAGCTTGTGA
GCAATGCAAGTGATGCTTTGGATAAGTTGAGATTTTTAAGTGTTACCGAG
CCCTCTCTTCTTGGAGATGCTGGCGATCTTGAGATTCGCATCAAGCCTGA
TCCAGAAAATGGGACCATCACCATAACGGATACTGGTATTGGAATGACTA
AAGAAGA
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