CX287287

Overview
NameCX287287
Unique NameCX287287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.702e-12
Identity = 32/70 (45.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  298 SGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            + EK ++ AEV +++ L++HSLY++K++FLREL+SNASDA DKLR+ S++   L+    D +I I  D +
Sbjct:    6 NSEKLKFDAEVGKVLKLVIHSLYTNKDIFLRELISNASDACDKLRYESLSNQDLIDGDTDFKIVISVDQD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 31/68 (45.59%), Postives = 52/68 (76.47%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E  ++ AEV +++++++HSLY++K++FLREL+SNASDA DKLR+ S   P+LL  + +L+I I  + +
Sbjct:   12 ENLKFDAEVGKVLNIVIHSLYTNKDIFLRELISNASDACDKLRYESQLNPNLLDLSDELKITISSNKD 79          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 1
Query:  310 FEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            + + A+ S++++L++HSLY HK+VFLREL+SNASDAL+KLR  S  +  LL D  +LEI I  + E
Sbjct:   10 YSFDADASKVLNLVIHSLYRHKDVFLRELISNASDALNKLREASYFDQELLEDNPELEILISLNKE 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_METRJ (Chaperone protein htpG OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            E+ E+ AEV RL+DL+VH+LYS +E+FLRELV+NA+DA+D+ RF ++T  +      D ++RI PD E
Sbjct:    6 ERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADAMDRRRFEALTS-AASALPPDAKVRIAPDKE 72          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BACSK (Chaperone protein htpG OS=Bacillus clausii (strain KSM-K16) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.835e-12
Identity = 33/69 (47.83%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            EK ++QAE  RL++++V+S+YS KE+FLREL+SNASDA+DK+ + S+T+ SL  +     I ++ D +N
Sbjct:    2 EKKQFQAESKRLLEMMVNSIYSQKEIFLRELISNASDAIDKMYYRSLTDDSLSFEKDRYAIYVEADKDN 70          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 32/72 (44.44%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            D + E   ++A+V++L+ ++VHS+YS K+VFLREL+SNA+DA ++LR+ ++++P+LL D    +I I  D E
Sbjct:    8 DGAAESRVFEADVAKLLQMMVHSVYSDKDVFLRELISNAADACERLRYDAISDPALLADDARPQIAITIDAE 79          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSL---LGDAGDLEIRIKPD 501
            E+ E+QAE  +L+DL+VHS+YS+K+ FLREL+SNASDALDKLR  +     L     D  DL I I+ D
Sbjct:    6 EQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRLEAFRNKDLDPRTVDTSDLHIEIEVD 74          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++   +L     +L IR+  D
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFD 69          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++   +L     +L IR+  D
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFD 69          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++   +L     +L IR+  D
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFD 69          
The following BLAST results are available for this feature:
BLAST of CX287287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
HTPG_EHRCJ3.702e-1245.71Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_WOLPM4.835e-1245.59Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_NEOSM4.835e-1251.52Chaperone protein htpG OS=Neorickettsia sennetsu (... [more]
HTPG_METRJ4.835e-1251.47Chaperone protein htpG OS=Methylobacterium radioto... [more]
HTPG_BACSK4.835e-1247.83Chaperone protein htpG OS=Bacillus clausii (strain... [more]
HTPG_NITHX8.247e-1244.44Chaperone protein htpG OS=Nitrobacter hamburgensis... [more]
HTPG_MYCLE8.247e-1253.62Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_BURTA8.247e-1253.03Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURPS8.247e-1253.03Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP68.247e-1253.03Chaperone protein htpG OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionC01006H04SK Veg1 Citrus clementina cDNA clone C01006H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287287 ID=CX287287; Name=CX287287; organism=Citrus clementina; type=EST; length=557bp
GTTCAAACCATCTTATTAAGCCAGCCCATTATCTTCTTCTCTCTCTGTAT
TCGAAGCCTTTTAATGGCTCCAGTTCTGAGCAGAACATTAGCCACTACCT
CTTTAGTGTCACTTCCAACTTCAACTCCTTTTTCTTTTAAACACTCCAAC
AACAAGGCCTTCAATTTCAGAAGCGCTTTTTTGCCGAGAAGTGGCGGCTT
AACTTGTGCTGGATTGAAGTGGAACCTTCAGAAGAGGAATAAAAGAGTCG
GGATACGGTGTGATGCTGCTGTTGCTGACAAAGAGGCCCCTGATACTTCT
GGTGAGAAGTTCGAGTACCAAGCCGAGGTCAGTCGCCTGATGGACTTGAT
TGTTCATAGTCTGTACAGCCACAAGGAGGTGTTCCTGCGAGAGCTTGTGA
GCAATGCAAGTGATGCTTTGGATAAGTTGAGATTTTTAAGTGTTACCGAG
CCCTCTCTTCTTGGAGATGCTGGCGATCTTGAGATTCGCATCAAGCCTGA
TCCAGAAAATGGGACCATCACCATAACGGATACTGGTATTGGAATGACTA
AAGAAGA
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