CX287287

Overview
NameCX287287
Unique NameCX287287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            ++FEY+AE+ +L+DLIVHSLY+H E+FLRELVSNA+DAL K RF S+T+  L+  AG+  I I  D E
Sbjct:   10 QEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNAADALSKARFSSLTDGGLMAAAGEDAIHITLDKE 77          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +T+ ++FEY+AE+ +L+DLIVHSLY+H E+FLRELVSNASDAL K RF ++T+ ++   +G+  IRI  D
Sbjct:    6 NTAVQEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNASDALSKARFSALTDDTMAKVSGEAAIRISLD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 38/69 (55.07%), Postives = 56/69 (81.16%), Query Frame = 1
Query:  301 GEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            GE F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+T+PS L    +L I+I P+ E
Sbjct:    7 GETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGKELFIKIIPNKE 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 37/66 (56.06%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  304 EKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+T+PS L    DL+I + PD
Sbjct:   15 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSCKDLKIELIPD 80          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.739e-15
Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +++ E   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++ +P LL   G+L IR+  D
Sbjct:    7 NSASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYD 76          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.739e-15
Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPD 501
            +++ E   +QAEV +L+ L++HSLYS+KE+FLRELVSNASDA DKLRF ++ +P LL   G+L IR+  D
Sbjct:    7 NSASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYD 76          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_XANOR (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae GN=htpG PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            DT  +   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLRF ++ +P LL  +G+L IR+  D +
Sbjct:    4 DTDKQTLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFEALVKPELLEGSGELRIRVDYDKD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_XANOM (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  292 DTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            DT  +   +Q EV +L+ L++HSLYS+KE+FLRELVSNA+DA DKLRF ++ +P LL  +G+L IR+  D +
Sbjct:    4 DTDKQTLGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFEALVKPELLEGSGELRIRVDYDKD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  286 APDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPE 507
            A DT  E   +Q EV +L+ L++HSLYS+KE+FLREL+SNASDA+DKLRF SV    LL +  +L +RI+ D +
Sbjct:    2 ATDTQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFESVANADLLAEDPNLRVRIEFDKD 75          
BLAST of CX287287 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.577e-15
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  289 PDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPEN 510
            P +S  +FEY+AE+ +L++LIVHSLY+H E+FLREL+SNASDAL K RF  ++    L  +GDL+I I  D E+
Sbjct:    5 PTSSVREFEYKAEMKQLLNLIVHSLYTHPEIFLRELISNASDALGKARFRMLSSDEGLDKSGDLKITITVDKES 78          
The following BLAST results are available for this feature:
BLAST of CX287287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 366
Match NameE-valueIdentityDescription
HTPG_PROVI2.097e-1558.82Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_PELLD2.097e-1555.71Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HSP83_ANOGA2.097e-1555.07Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
H90A1_DANRE2.097e-1556.06Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HTPG_BORPA2.739e-1555.71Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR2.739e-1555.71Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_XANOR3.577e-1552.78Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_XANOM3.577e-1552.78Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_MARMS3.577e-1554.05Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_CHLTE3.577e-1554.05Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]

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Properties
Property NameValue
Genbank descriptionC01006H04SK Veg1 Citrus clementina cDNA clone C01006H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287287 ID=CX287287; Name=CX287287; organism=Citrus clementina; type=EST; length=557bp
GTTCAAACCATCTTATTAAGCCAGCCCATTATCTTCTTCTCTCTCTGTAT
TCGAAGCCTTTTAATGGCTCCAGTTCTGAGCAGAACATTAGCCACTACCT
CTTTAGTGTCACTTCCAACTTCAACTCCTTTTTCTTTTAAACACTCCAAC
AACAAGGCCTTCAATTTCAGAAGCGCTTTTTTGCCGAGAAGTGGCGGCTT
AACTTGTGCTGGATTGAAGTGGAACCTTCAGAAGAGGAATAAAAGAGTCG
GGATACGGTGTGATGCTGCTGTTGCTGACAAAGAGGCCCCTGATACTTCT
GGTGAGAAGTTCGAGTACCAAGCCGAGGTCAGTCGCCTGATGGACTTGAT
TGTTCATAGTCTGTACAGCCACAAGGAGGTGTTCCTGCGAGAGCTTGTGA
GCAATGCAAGTGATGCTTTGGATAAGTTGAGATTTTTAAGTGTTACCGAG
CCCTCTCTTCTTGGAGATGCTGGCGATCTTGAGATTCGCATCAAGCCTGA
TCCAGAAAATGGGACCATCACCATAACGGATACTGGTATTGGAATGACTA
AAGAAGA
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