CX287325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOB_BACTN (Biotin synthase OS=Bacteroides thetaiotaomicron GN=bioB PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 33/117 (28.21%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 352 FGR G +F + ++PD++ KAL+ YM + A+L S ++++ I + + +F HG T+ G+P++CAVA ++++ + E V +I + ++ + P + ++R G I Sbjct: 568 FGRTGKLFAWEHAGVEPDIMCIGKALTGGYMTLSAVLASNQIADTISNHAPK--AFMHGPTFMGNPLACAVACASVRLLLDSGWAENVKRIEAQLKEELAPARKFPQVADVRILGAI 682
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOA_SALTY (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Salmonella typhimurium GN=bioA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 352 FGR G +F C+ I PD++ KAL+ M + A L + +V+E I + G F HG T+ G+P++CAVA L + + +QV I + + + SP + ++R G I Sbjct: 251 FGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTRQVAETI--SNGEAGCFMHGPTFMGNPLACAVACANLTLLESGEWRQQVASIESQLRAELAPAQSSPWVADVRVLGAI 365
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_THET8 (Acetylornithine/acetyl-lysine aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=argD PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 GR G F + + I PD+++ AKAL +P+GA ++ EV+ ++ HG T+ G+P++ A + A++ + + E+ ++ P F + ++A SP I E+RG GL++G E + +P Sbjct: 232 GRTGKRFAFEHFGIVPDILTLAKALGGG-VPLGAAVMREEVAR-------SMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI-PSPKIREVRGMGLMVGLELKEKAAP 349
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_ECOL6 (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli O6 GN=argD PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 364 GR G +F Y + PD+++ AKAL + P+ A+L + E++ H S HG TY G+P++CAVA A I ++E + F D ++ + +IRG GL++G E Sbjct: 233 GRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTAEIASAFHPGS-------HGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQHFVDHLQKIDQQYDVFSDIRGMGLLIGAE 345
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_DEIRA (Acetylornithine/acetyl-lysine aminotransferase OS=Deinococcus radiodurans GN=argD PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 F R G MF C+ + + PD ++ AKA++ P A + EV++ + + HG T+ G+P+S A + +L+ K + EQ + D ++A SP I E+RG GL++G E + +P Sbjct: 232 FCRTGKMFACEHFGVIPDGMTLAKAIAGG-TPTAAFAMMSEVAD-------RMPAGGHGTTFGGNPLSMAAGVASLRAMKREGLAEQAREKGAYMMDKLRAI-QSPKIREVRGLGLMIGVELKEKSAP 350
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: AGT2_RAT (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Rattus norvegicus GN=Agxt2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 41/139 (29.50%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 FGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF-TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP----KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFP 400 FGRLG+ F G + PD+V+ AK + + + P+ A++ +PE++ ++L H F T+ G P++CA+ L++ +E N+ ++ KF K + I+G++RG GL++G E +K +P P Sbjct: 324 FGRLGSHFWGFQTHDTMPDIVTMAKGIGNGF-PMAAVVTTPEIA-------SSLAKHLHHFSTFGGSPLACAIGSAVLEVIEEENLQRNSQEVGTYMLLKF---AKLRDEFDIVGDVRGKGLMVGIEMVQDKISRQPLP 451
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_XANCP (Acetylornithine aminotransferase OS=Xanthomonas campestris pv. campestris GN=argD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.192e-12 Identity = 43/123 (34.96%), Postives = 70/123 (56.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFA 370 GR G++F + + PD+V+ AKAL + PIGA+L P+V+E T+ +HG T+ G+P++ AVA AL+ I E V + + + G++A ++ + +IRG GL+LG A Sbjct: 234 GRTGSLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAE-------TMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAENVARQSAALRAGLEALNAEFGVFAQIRGRGLMLGAVLA 348
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_SULSO (Acetylornithine/acetyl-lysine aminotransferase OS=Sulfolobus solfataricus GN=argD PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.192e-12 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADNKS 382 FGR G ++ + IKPD+++ KA+ + P+ A+ + +SE I HG TY G+P++ A A K+ K I EQ K F +K D I+ EIRG GL++G + N S Sbjct: 214 FGRTGKIWAYQHFDIKPDILTAGKAIGGGF-PVSAVFLPNWISEKIEEGD-------HGSTYGGNPLAAAAVTAACKVAKSEKIAEQAQKKGELFMRILKEKLEDFKIVREIRGLGLMIGIDLKVNPS 333
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.781e-12 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI----YKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 376 GR G MF + Y ++PD+++ AKAL +PIGA+++ E+++ L HG T+ G+P++C+ A+ ++++ K+ ++E+ K ++ ++ ++ I E+RG GL++G E N Sbjct: 230 GRTGRMFAFEHYGVEPDILTLAKALGGG-VPIGAVVLKEEIAK-------ALSYGDHGTTFGGNPLACSAALASVEVIEELIKDDKVIEKGKYFIRKLENLIEKYN---FIKEVRGLGLMIGAELEFN 346
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAS1 (Ornithine aminotransferase 2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocD2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.857e-12 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385 GR G +F D ++KPD+ KAL +PI +L EV V T G SHG T+ G+P++CAV+ AL + + ++ + ++ F+ ++ D P I E+RG GL +G E + P Sbjct: 233 GRSGKLFATDWDNVKPDVYILGKALGGGVLPISVVLADEEVLGVF-----TPG--SHGSTFGGNPLACAVSNAALDVIIDEDLPGRSLELGDYFKSELEKI-DHPAIKEVRGRGLFIGIELNEAARP 351 The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bpback to top |