CX287325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALAR (Putrescine aminotransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=patA PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.011e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPDLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALTY (Putrescine aminotransferase OS=Salmonella typhimurium GN=patA PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALSV (Putrescine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALPC (Putrescine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=patA PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALPB (Putrescine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALNS (Putrescine aminotransferase OS=Salmonella newport (strain SL254) GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALG2 (Putrescine aminotransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=patA PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALEP (Putrescine aminotransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=patA PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALDC (Putrescine aminotransferase OS=Salmonella dublin (strain CT_02021853) GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEFVDNET 400
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: PAT_SALCH (Putrescine aminotransferase OS=Salmonella choleraesuis GN=patA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKS 382 GR G MF C+ +++PD++ AKAL MPIGA + + EV V+ F H T+ G+P++CA A+ + + E+N+ Q + DG + + ++ + RG G+++ EF DN++ Sbjct: 278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNET 400 The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bpback to top |